RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 TM6SF2Q9BZW4 377 aa11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 RSPH9Q9H1X1 276 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 TNKS2Q9H2K2 1166 aa11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 DYRK4Q9NR20 520 aa11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 SALL4Q9UJQ4 1053 aa11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 GMEB2Q9UKD1 530 aa11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 AMFRQ9UKV5 643 aa11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 GUCA1BQ9UMX6 200 aa11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 INVSQ9Y283 1065 aa11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 DUSP10Q9Y6W6 482 aa11.21□□□□□ -0.61
CSPG4P2Y-201ENST00000306853 ABCA7Q8IZY2 2146 aa11.21□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 TP53BP1Q12888 1972 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 IGHV1OR15-9A0A0B4J2B8 117 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CCDC66A2RUB6 948 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 GRID2IPA4D2P6 1211 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 APOL1O14791 398 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 MID1O15344 667 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 SMAD6O43541 496 aaKnown RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 HRO43593 1189 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 MFSD11O43934 449 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PRAMEF11O60813 436 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PALMO75781 387 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 IGSF6O95976 241 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PRNPP04156 253 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 VAV1P15498 845 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 ZFXP17010 805 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 C5AR1P21730 350 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CTNNA1P35221 906 aaKnown RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CETN2P41208 172 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 RPL6Q02878 288 aaKnown RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 RAD51Q06609 339 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 IL10RBQ08334 325 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 RFTN1Q14699 578 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 LPAL2Q16609 132 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 INO80DQ53TQ3 878 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 AFMIDQ63HM1 303 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 NCBP2-AS2Q69YL0 99 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 LEKR1Q6ZMV7 388 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 LPCAT2Q7L5N7 544 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PEX26Q7Z412 305 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 KBTBD6Q86V97 674 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 ARHGAP12Q8IWW6 846 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 RNF10Q8N5U6 811 aaKnown RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 UBL4BQ8N7F7 174 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PIP4K2CQ8TBX8 421 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 RAPGEF5Q92565 580 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 ISG20Q96AZ6 181 aaKnown RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 FAF2Q96CS3 445 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PPP1R16AQ96I34 528 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 GDAP1L1Q96MZ0 367 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 RNF157Q96PX1 679 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 OMDQ99983 421 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CINPQ9BW66 212 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PABPC3Q9H361 631 aaKnown RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 ZDHHC6Q9H6R6 413 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 ETNK2Q9NVF9 386 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 HAUS2Q9NVX0 235 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 USP36Q9P275 1121 aaKnown RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 NCDNQ9UBB6 729 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 TRIM10Q9UDY6 481 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 IL36AQ9UHA7 158 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 IPO11Q9UI26 975 aaKnown RBP11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 MFHAS1Q9Y4C4 1052 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 MUC6Q6W4X9 2439 aa11.2□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 A0A1W2PP55 124 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PROB1E7EW31 1015 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 J3KR12 359 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 MCF2LO15068 1137 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 NEBLO76041 1014 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 ZRANB2O95218 330 aaKnown RBP eCLIP11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 GSRP00390 522 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 MX2P20592 715 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 IL4RP24394 825 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CTNNA2P26232 953 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CD6P30203 668 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CHRNA3P32297 505 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 SLC8A1P32418 973 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 TPMTP51580 245 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CCDC15Q0P6D6 951 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 TFDP2Q14188 446 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 ZNF235Q14590 738 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 NUMA1Q14980 2115 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 MAP7D1Q3KQU3 841 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 CARD16Q5EG05 197 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 TFDP3Q5H9I0 405 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 KAZNQ674X7 775 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 LAIR1Q6GTX8 287 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 TIGD7Q6NT04 549 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 USP30Q70CQ3 517 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 FAM124AQ86V42 546 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 LRRC49Q8IUZ0 686 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 KATNAL2Q8IYT4 538 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 FAM160A2Q8N612 972 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 NETO2Q8NC67 525 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 OR2AP1Q8NGE2 309 aa11.19□□□□□ -0.62
CSPG4P2Y-201ENST00000306853 PCDH19Q8TAB3 1148 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms