RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PDK1Q15118 436 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 KIZQ2M2Z5 673 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 DPY19L1Q2PZI1 675 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 MAP3K21Q5TCX8 1036 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 MROH9Q5TGP6 573 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 ATG16L1Q676U5 607 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PPP4R4Q6NUP7 873 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 FAM117BQ6P1L5 589 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 C1orf228Q6PIY5 440 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 SLC16A12Q6ZSM3 486 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 SAMD7Q7Z3H4 446 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 AMIGO2Q86SJ2 522 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 RASSF3Q86WH2 238 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 NUDCD3Q8IVD9 361 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 NDUFAF2Q8N183 169 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 TOP1MTQ969P6 601 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 HSPBAP1Q96EW2 488 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 LRCH3Q96II8 777 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 CSPG4P5Q96PW8 444 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 NPY6RQ99463 290 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PKMYT1Q99640 499 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 CENPKQ9BS16 269 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 LIN28AQ9H9Z2 209 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 MAN1C1Q9NR34 630 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 SNX15Q9NRS6 342 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 SYBUQ9NX95 663 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 MAP10Q9P2G4 905 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 FBXO10Q9UK96 956 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 COPG1Q9Y678 874 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 ERI2A8K979 691 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 MCF2LO15068 1137 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 H2AFYO75367 372 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 TRMUO75648 421 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 PRR35P0CG20 571 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 KITP10721 976 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 FUT4P22083 530 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 IREB2P48200 963 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 ADARB1P78563 741 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 ORC1Q13415 861 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 MED21Q13503 144 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 DLG2Q15700 870 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 FSTL4Q6MZW2 842 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 HACD2Q6Y1H2 254 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PAQR9Q6ZVX9 377 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 RETREG3Q86VR2 466 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 TOP6BLQ8N6T0 577 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 RXFP2Q8WXD0 754 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 TP53INP1Q96A56 240 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 ASB9Q96DX5 294 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 DACH2Q96NX9 599 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 AGAP2Q99490 1192 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 HNRNPABQ99729 332 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 APOL6Q9BWW8 343 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 GATA5Q9BWX5 397 aaPredicted RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 MEAF6Q9HAF1 191 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 CSNK1G1Q9HCP0 422 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 ATP13A1Q9HD20 1204 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 TXNRD2Q9NNW7 524 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 TMPRSS4Q9NRS4 437 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 HOMER2Q9NSB8 354 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 MTF2Q9Y483 593 aaPredicted RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 TCAF1Q9Y4C2 921 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 SMIM35A0A1B0GVV1 85 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 XPO1O14980 1071 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 HTRA2O43464 458 aaPredicted RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 OPHN1O60890 802 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 JUNBP17275 347 aaPredicted RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 ARF4P18085 180 aaPredicted RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 HADHAP40939 763 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PITX1P78337 314 aaPredicted RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 CRADDP78560 199 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 TMPRSS15P98073 1019 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 GRB14Q14449 540 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 LY6KQ17RY6 165 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 TMEM198Q66K66 360 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 POTEAQ6S8J7 498 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 ZYG11AQ6WRX3 759 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 MAP7D3Q8IWC1 876 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PYROXD2Q8N2H3 581 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 RNF149Q8NC42 400 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 RDH11Q8TC12 318 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 LZICQ8WZA0 190 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 GPR22Q99680 433 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 LPIN3Q9BQK8 851 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 NT5C1AQ9BXI3 368 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 GRIP2Q9C0E4 1043 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 SUDS3Q9H7L9 328 aaPredicted RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 NTN4Q9HB63 628 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 RAB6BQ9NRW1 208 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 AGPAT4Q9NRZ5 378 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 IGSF5Q9NSI5 407 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 TUBA8Q9NY65 449 aaPredicted RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 UTP6Q9NYH9 597 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 HACD3Q9P035 362 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PMF1-BGLAPU3KQ54 211 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 MTCL1Q9Y4B5 1905 aaKnown RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 KIAA1549LQ6ZVL6 1849 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 A0A0A0MRY4 1105 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 H3BMQ9 156 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 APOL1O14791 398 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms