RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 TMC3Q7Z5M5 1100 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SYVN1Q86TM6 617 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SYNE4Q8N205 404 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 NSMCE3Q96MG7 304 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 HMX1Q9NP08 348 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 ARHGEF33A8MVX0 844 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 LPLP06858 475 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 GTF2A2P52657 109 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 DCST1Q5T197 706 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SPAG16Q8N0X2 631 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SMURF2Q9HAU4 748 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 NR5A2O00482 541 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 USP51Q70EK9 711 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 FIG4Q92562 907 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 TEX13BQ9BXU2 312 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 NOD2Q9HC29 1040 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 ABCB9Q9NP78 766 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 MED31Q9Y3C7 131 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 CCNOP22674 350 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 GSTM2P28161 218 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 CCKBRP32239 447 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 RPIAP49247 311 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 GTPBP2Q9BX10 602 aaKnown RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 MRPL17Q9NRX2 175 aaKnown RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 ATAD2BQ9ULI0 1458 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 ZBTB5O15062 677 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 NCK1P16333 377 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SLC10A7Q0GE19 358 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 TFDP3Q5H9I0 405 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 PHYKPLQ8IUZ5 450 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 MINDY2Q8NBR6 621 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 GANQ9H2C0 597 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 RRP15Q9Y3B9 282 aaKnown RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 DNAJC13O75165 2243 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 PDE8BO95263 885 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SERPINF2P08697 491 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 ZNF16P17020 682 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 CDH5P33151 784 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 CSTF2P33240 577 aaKnown RBP eCLIP8.17□□□□□ -1.12e-6■■■■□ 25.9
PCNX1-201ENST00000304743 CRY2Q49AN0 593 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 METTL3Q86U44 580 aaKnown RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 UBR7Q8N806 425 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SNIP1Q8TAD8 396 aaKnown RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 COQ8BQ96D53 544 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 ENDOUP21128 410 aaKnown RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 TLR1Q15399 786 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 C1orf94Q6P1W5 598 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 FAM124AQ86V42 546 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 LRRC8AQ8IWT6 810 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SLC38A3Q99624 504 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 PABPC3Q9H361 631 aaKnown RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 AP4E1Q9UPM8 1137 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SH2D7A6NKC9 451 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 RPL3P39023 403 aaKnown RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 MPPED2Q15777 294 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 VPS72Q15906 364 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 KLHL26Q53HC5 615 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 CMTR2Q8IYT2 770 aaKnown RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 OR7G1Q8NGA0 311 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 NXPE2Q96DL1 559 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SGSM3Q96HU1 749 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 ST3GAL5Q9UNP4 418 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 CIAO1O76071 339 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 FXR2P51116 673 aaKnown RBP eCLIP8.17□□□□□ -1.17e-7■■■□□ 18.1
PCNX1-201ENST00000304743 SMIM11AP58511 58 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 DRAP1Q14919 205 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 ZNF720Q7Z2F6 126 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SGF29Q96ES7 293 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SLC4A5Q9BY07 1137 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 SENP6Q9GZR1 1112 aaPredicted RBP8.17□□□□□ -1.1
PCNX1-201ENST00000304743 MROH8Q9H579 483 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 REEP1Q9H902 201 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 EXD2Q9NVH0 621 aa8.17□□□□□ -1.1
PCNX1-201ENST00000304743 CCDC182A6NF36 153 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 PPEF2O14830 753 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 ITIH1P19827 911 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 DGUOKQ16854 277 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 ERICH5Q6P6B1 374 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 ARSKQ6UWY0 536 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 SATL1Q86VE3 508 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 SMYD4Q8IYR2 804 aaPredicted RBP8.16□□□□□ -1.1
PCNX1-201ENST00000304743 MREGQ8N565 214 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 NAT14Q8WUY8 206 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 NOL6Q9H6R4 1146 aaKnown RBP8.16□□□□□ -1.1
PCNX1-201ENST00000304743 GPAMQ9HCL2 828 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 GPRC5BQ9NZH0 403 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 CCNE1P24864 410 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 TAS2R41P59536 307 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 NUP54Q7Z3B4 507 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 CIR1Q86X95 450 aaPredicted RBP8.16□□□□□ -1.1
PCNX1-201ENST00000304743 PSTKQ8IV42 348 aaKnown RBP8.16□□□□□ -1.1
PCNX1-201ENST00000304743 GRAMD1CQ8IYS0 662 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 ANKK1Q8NFD2 765 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 DQX1Q8TE96 717 aaKnown RBP8.16□□□□□ -1.1
PCNX1-201ENST00000304743 FRS2Q8WU20 508 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 TNFAIP8L1Q8WVP5 186 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 MIEF2Q96C03 454 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 EYA1Q99502 592 aa8.16□□□□□ -1.1
PCNX1-201ENST00000304743 NCKIPSDQ9NZQ3 722 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms