RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 AMHP03971 560 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 PTGIRP43119 386 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 MRPS22P82650 360 aaKnown RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 UBE3AQ05086 875 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 MBTD1Q05BQ5 628 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 TJAP1Q5JTD0 557 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 OMDQ99983 421 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 EDF1O60869 148 aaKnown RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 ATP5F1P24539 256 aaPredicted RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 NEK3P51956 506 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 AIF1P55008 147 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 ALDH6A1Q02252 535 aaKnown RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 SQLEQ14534 574 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 SPATA6LQ8N4H0 392 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 MTFMTQ96DP5 389 aaKnown RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 RNASEH1O60930 286 aaKnown RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 PTP4A2Q12974 167 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 MFSD5Q6N075 450 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 LBX2Q6XYB7 198 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 TMEM26Q6ZUK4 368 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 FAM126BQ8IXS8 530 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 TNS4Q8IZW8 715 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 GLMNQ92990 594 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 CAPN10Q9HC96 672 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 HMX1Q9NP08 348 aaPredicted RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 CNGB3Q9NQW8 809 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 PCDHA2Q9Y5H9 948 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 LRCH4O75427 683 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 ABCB1P08183 1280 aaPredicted RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 SERPINA6P08185 405 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 ANXA11P50995 505 aaKnown RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 NUP107P57740 925 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 STK40Q8N2I9 435 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 PTGR2Q8N8N7 351 aaPredicted RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 TMEM159Q96B96 161 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 BDH2Q9BUT1 245 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 TMPRSS4Q9NRS4 437 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 SPG21Q9NZD8 308 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 PADI4Q9UM07 663 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 ADCY6O43306 1168 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 TSPAN1O60635 241 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 DENND1CQ8IV53 801 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 C1orf127Q8N9H9 656 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 CSPG4P5Q96PW8 444 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 FAM105AQ9NUU6 356 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 TKTP29401 623 aaKnown RBP16.55■□□□□ 0.24
BRD3-201ENST00000303407 DUSP28Q4G0W2 176 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 STXBP5Q5T5C0 1151 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 STRADAQ7RTN6 431 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 STAG3L4Q8TBR4 150 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 RDH11Q8TC12 318 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 PHACTR1Q9C0D0 580 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 APOBEC3GQ9HC16 384 aaKnown RBP16.55■□□□□ 0.24
BRD3-201ENST00000303407 TMEM39AQ9NV64 488 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 OPTCQ9UBM4 332 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 SFMBT1Q9UHJ3 866 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 EFR3BQ9Y2G0 817 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 ATXN2Q99700 1313 aaKnown RBP16.55■□□□□ 0.24
BRD3-201ENST00000303407 FAM155BO75949 473 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 MTA2O94776 668 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 IFNA14P01570 189 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 CYP2A6P11509 494 aaPredicted RBP16.55■□□□□ 0.24
BRD3-201ENST00000303407 GRIK3Q13003 919 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 OTUD3Q5T2D3 398 aaPredicted RBP16.55■□□□□ 0.24
BRD3-201ENST00000303407 DCLRE1AQ6PJP8 1040 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 AFTPHQ6ULP2 937 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 TPGS1Q6ZTW0 290 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 TRMT11Q7Z4G4 463 aaKnown RBP16.55■□□□□ 0.24
BRD3-201ENST00000303407 ATG16L2Q8NAA4 619 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 TRPC4APQ8TEL6 797 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 RNF145Q96MT1 663 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 MRPL57Q9BQC6 102 aaKnown RBP16.55■□□□□ 0.24
BRD3-201ENST00000303407 TMCC3Q9ULS5 477 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 ACOX1Q15067 660 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 EML3Q32P44 896 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 LIPMQ5VYY2 423 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 IRGCQ6NXR0 463 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 PANX3Q96QZ0 392 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 MAN1C1Q9NR34 630 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 SLC27A5Q9Y2P5 690 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 KDM3BQ7LBC6 1761 aa16.55■□□□□ 0.24
BRD3-201ENST00000303407 MAXP61244 160 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 CTBP1Q13363 440 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 DDR2Q16832 855 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 SLC51AQ86UW1 340 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 CYP4Z1Q86W10 505 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 OOSP2Q86WS3 158 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 CPT1BQ92523 772 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 NDRG1Q92597 394 aaKnown RBP16.54■□□□□ 0.24
BRD3-201ENST00000303407 RMND5BQ96G75 393 aaPredicted RBP16.54■□□□□ 0.24
BRD3-201ENST00000303407 CAB39LQ9H9S4 337 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 MIEF1Q9NQG6 463 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 SF3B1O75533 1304 aaKnown RBP eCLIP16.54■□□□□ 0.241e-10■■■■■ 107
BRD3-201ENST00000303407 TNFAIP8O95379 198 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 LDLRP01130 860 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 ABL2P42684 1182 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 SLC44A1Q8WWI5 657 aa16.54■□□□□ 0.24
BRD3-201ENST00000303407 FAM126AQ9BYI3 521 aaPredicted RBP16.54■□□□□ 0.24
BRD3-201ENST00000303407 SENP6Q9GZR1 1112 aaPredicted RBP16.54■□□□□ 0.24
BRD3-201ENST00000303407 MAF1Q9H063 256 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms