RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ARHGAP9Q9BRR9 750 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 CYP3A43Q9HB55 503 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 TAS2R13Q9NYV9 303 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 USP15Q9Y4E8 981 aaPredicted RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 RHPN2P1A8MT19 583 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 EPHB6O15197 1021 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 DAB1O75553 588 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 KLHL2O95198 593 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 KRT8P05787 483 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 SMPD1P17405 629 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 HTR1BP28222 390 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 MC4RP32245 332 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 ARCN1P48444 511 aaKnown RBP7.9□□□□□ -1.15
SCN9A-201ENST00000303354 SARSP49591 514 aaKnown RBP7.9□□□□□ -1.15
SCN9A-201ENST00000303354 CYP4F3Q08477 520 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 PCBP2Q15366 365 aaKnown RBP eCLIP7.9□□□□□ -1.15
SCN9A-201ENST00000303354 DCLRE1AQ6PJP8 1040 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 RAVER1Q8IY67 606 aaKnown RBP7.9□□□□□ -1.15
SCN9A-201ENST00000303354 VANGL1Q8TAA9 524 aaPredicted RBP7.9□□□□□ -1.15
SCN9A-201ENST00000303354 CHST7Q9NS84 486 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 ARHGAP20Q9P2F6 1191 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 DUSP12Q9UNI6 340 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 SPHKAPQ2M3C7 1700 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 TPP1O14773 563 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 AVILO75366 819 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 UGT2B4P06133 528 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF24P17028 368 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 PHF19Q5T6S3 580 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 VITQ6UXI7 678 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 OR8H2Q8N162 312 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 OR52K2Q8NGK3 314 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 PIGKQ92643 395 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.9□□□□□ -1.15
SCN9A-201ENST00000303354 ARHGEF9O43307 516 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 S100A5P33763 92 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 RPL4P36578 427 aaKnown RBP7.9□□□□□ -1.15
SCN9A-201ENST00000303354 GLUD2P49448 558 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 FAAP100Q0VG06 881 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 CYP27C1Q4G0S4 372 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 PPP1R2P1Q96PQ5 205 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 ZYG11BQ9C0D3 744 aa7.9□□□□□ -1.15
SCN9A-201ENST00000303354 HIST1H2ABP04908 130 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CSH1P0DML2 217 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CSH2P0DML3 217 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 EFNA1P20827 205 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 NRIP1P48552 1158 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 ANXA11P50995 505 aaKnown RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 RTP1P59025 263 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 NFATC2Q13469 925 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 HIST3H2AQ7L7L0 130 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 OTOP3Q7RTS5 596 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 WDR36Q8NI36 951 aaKnown RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF563Q8TA94 476 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 HIST1H2ACQ93077 130 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 NSL1Q96IY1 281 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 TTPALQ9BTX7 342 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 DCLK3Q9C098 648 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 TRIT1Q9H3H1 467 aaKnown RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 NCKIPSDQ9NZQ3 722 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 ARMCX1Q9P291 453 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CDC42BPBQ9Y5S2 1711 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 A0A0G2JN53 185 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 PSMD11O00231 422 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 MYBPC1Q00872 1141 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 MTDHQ86UE4 582 aaKnown RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CFAP206Q8IYR0 622 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 KAT2AQ92830 837 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CMTM5Q96DZ9 223 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 VPS33BQ9H267 617 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 ALDH8A1Q9H2A2 487 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 SEPT3Q9UH03 358 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 ATP5HO75947 161 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 SERPINH1P50454 418 aaKnown RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 PGDP52209 483 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 TRIM25Q14258 630 aaKnown RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 DPP10Q8N608 796 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CFAP20Q9Y6A4 193 aaKnown RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 PSMD9O00233 223 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CDH2P19022 906 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 TM4SF1P30408 202 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 IRF8Q02556 426 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 IZUMO1Q8IYV9 350 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 OR5M3Q8NGP4 307 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CCT8L2Q96SF2 557 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 A0A096LPK6 155 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 OR6B1O95007 311 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CCNIQ14094 377 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 ADGRG2Q8IZP9 1017 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 NEK7Q8TDX7 302 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 HDAC7Q8WUI4 952 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 NDEL1Q9GZM8 345 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CAB39LQ9H9S4 337 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 ATP8B1O43520 1251 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 PEX1O43933 1283 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 LINC00032P0C843 101 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CCDC166P0CW27 439 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 NT5EP21589 574 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 MTAPQ13126 283 aa7.89□□□□□ -1.15
SCN9A-201ENST00000303354 CPSF6Q16630 551 aaKnown RBP eCLIP7.89□□□□□ -1.15
SCN9A-201ENST00000303354 FNBP1LQ5T0N5 605 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms