RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ZNF557Q8N988 423 aaPredicted RBP25.07■■□□□ 1.6
GTF2A1-201ENST00000298173 TSEN2Q8NCE0 465 aaKnown RBP25.07■■□□□ 1.6
GTF2A1-201ENST00000298173 RBM15Q96T37 977 aaKnown RBP eCLIP25.07■■□□□ 1.6
GTF2A1-201ENST00000298173 MLPHQ9BV36 600 aaPredicted RBP25.07■■□□□ 1.6
GTF2A1-201ENST00000298173 FRMD8Q9BZ67 464 aaPredicted RBP25.07■■□□□ 1.6
GTF2A1-201ENST00000298173 CD207Q9UJ71 328 aa25.07■■□□□ 1.6
GTF2A1-201ENST00000298173 VPS28Q9UK41 221 aa25.07■■□□□ 1.6
GTF2A1-201ENST00000298173 ACTL7AQ9Y615 435 aa25.07■■□□□ 1.6
GTF2A1-201ENST00000298173 E7ESA3 106 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 F5H423 210 aaPredicted RBP25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 MAP2K7O14733 419 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 SNAP91O60641 907 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 SUN1O94901 812 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 GBP2P32456 591 aaPredicted RBP25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 PLEKHG6Q3KR16 790 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 FNBP1LQ5T0N5 605 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 ZNF534Q76KX8 674 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 HDXQ7Z353 690 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 CAND1Q86VP6 1230 aaKnown RBP25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 ST13P5Q8NFI4 369 aaPredicted RBP25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 ACDQ96AP0 544 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 ELSPBP1Q96BH3 223 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 OXNAD1Q96HP4 312 aaPredicted RBP25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 SLC2A11Q9BYW1 496 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 PLA2G2FQ9BZM2 168 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 NT5MQ9NPB1 228 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 UBA2Q9UBT2 640 aaPredicted RBP25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 VPS51Q9UID3 782 aa25.06■■□□□ 1.6
GTF2A1-201ENST00000298173 ERI2A8K979 691 aaKnown RBP25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 E7EVH7 732 aa25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 HOXC11O43248 304 aaPredicted RBP25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 TNNT3P45378 269 aaPredicted RBP25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 KIAA0907Q7Z7F0 614 aaPredicted RBP25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 SERPINB12Q96P63 405 aa25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 SLC25A51Q9H1U9 297 aa25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 THG1LQ9NWX6 298 aaKnown RBP25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 USP15Q9Y4E8 981 aaPredicted RBP25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 XIRP2A4UGR9 3374 aa25.05■■□□□ 1.6
GTF2A1-201ENST00000298173 CXorf51AA0A1B0GTR3 108 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 ALOX15BO15296 676 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 AP2A1O95782 977 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 MAGEA3P43357 314 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 PMS2P54278 862 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 ARL4CP56559 192 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 CYTH1Q15438 398 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 UAP1Q16222 522 aaPredicted RBP25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 HIF1AQ16665 826 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 MSS51Q4VC12 460 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 INO80DQ53TQ3 878 aaPredicted RBP25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 SPDYCQ5MJ68 293 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 ALG1LQ6GMV1 187 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 PARM1Q6UWI2 310 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 PPP1R21Q6ZMI0 780 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 CEP128Q6ZU80 1094 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 CCDC25Q86WR0 208 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 IMP4Q96G21 291 aaKnown RBP25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 ZFYVE19Q96K21 471 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 PSKH2Q96QS6 385 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 C2orf49Q9BVC5 232 aaPredicted RBP25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 SEMA4AQ9H3S1 761 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 ABCB8Q9NUT2 735 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 MUSKO15146 869 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 EIF3HO15372 352 aaKnown RBP eCLIP25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 ATP8B1O43520 1251 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 SASH3O75995 380 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 ARSAP15289 507 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 GRIA1P42261 906 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 PRPSAP1Q14558 356 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 PDGFRLQ15198 375 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 PDIK1LQ8N165 341 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 SPATA22Q8NHS9 363 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 ARRDC2Q8TBH0 407 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 FGF14Q92915 247 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 TADA1Q96BN2 335 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 PPP1R2P1Q96PQ5 205 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 EPB41L4BQ9H329 900 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 EBF3Q9H4W6 596 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 DNAJC17Q9NVM6 304 aaKnown RBP25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 EPS15L1Q9UBC2 864 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 SEPT3Q9UH03 358 aa25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 AAR2Q9Y312 384 aaKnown RBP25.04■■□□□ 1.6
GTF2A1-201ENST00000298173 OTOL1A6NHN0 477 aaPredicted RBP25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 PSMD3O43242 534 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 NEBLO76041 1014 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 NFATC1O95644 943 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 ADH1CP00326 375 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 ADH5P11766 374 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 HSD17B3P37058 310 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 MAXP61244 160 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 NIPAL4Q0D2K0 466 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 IHHQ14623 411 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 GAB4Q2WGN9 574 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 PITRM1Q5JRX3 1037 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 GPR153Q6NV75 609 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 CENPUQ71F23 418 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 PRPF39Q86UA1 669 aaKnown RBP25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 ATP2A3Q93084 1043 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 HPS4Q9NQG7 708 aa25.03■■□□□ 1.6
GTF2A1-201ENST00000298173 H3BQ06 376 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms