RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 NDRG1Q92597 394 aaKnown RBP10.35□□□□□ -0.75
CCDC36-201ENST00000296449 TMIGD2Q96BF3 282 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 ASB9Q96DX5 294 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 PHF12Q96QT6 1004 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 GPR22Q99680 433 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 CCT7Q99832 543 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 SEMA6AQ9H2E6 1030 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 CHRAC1Q9NRG0 131 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 ADA2Q9NZK5 511 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 RSL24D1Q9UHA3 163 aaKnown RBP10.35□□□□□ -0.75
CCDC36-201ENST00000296449 TLK1Q9UKI8 766 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 AP4S1Q9Y587 144 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 SQORQ9Y6N5 450 aa10.35□□□□□ -0.75
CCDC36-201ENST00000296449 A0A0G2JMZ2 1700 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 LRRC37A2A6NM11 1700 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 ZNF638Q14966 1978 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 SYNJ2BP-COX16A0A087WUM0 186 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 TMEM233B4DJY2 109 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 TARM1B6A8C7 271 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 DDHD2O94830 711 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 VTNP04004 478 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 C8BP07358 591 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 SAT1P21673 171 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 ALDH3B2P48448 385 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 IKBKEQ14164 716 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 KCTD11Q693B1 232 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 UNC93AQ86WB7 457 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 LRRC43Q8N309 656 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 FSTL5Q8N475 847 aaPredicted RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 KDM1BQ8NB78 822 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 GRIN3AQ8TCU5 1115 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 KCTD4Q8WVF5 259 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 LRTOMTQ8WZ04 291 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 TOP1MTQ969P6 601 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 KLRG1Q96E93 195 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 SCYL1Q96KG9 808 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 ZMAT2Q96NC0 199 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 MRPL40Q9NQ50 206 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 UTP6Q9NYH9 597 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 COX16Q9P0S2 106 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 ANKRD6Q9Y2G4 727 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 PCDHGA7Q9Y5G6 932 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 ZSWIM8A7E2V4 1837 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 CITO14578 2027 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 ARHGEF37A1IGU5 675 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 KCNU1A8MYU2 1149 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 DCLK1O15075 740 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 ZSCAN9O15535 394 aaPredicted RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 DLX3O60479 287 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 CSPG5O95196 566 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 H6PDO95479 791 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 PDGFRBP09619 1106 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 SLC35E2BP0CK96 405 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 HSPA1AP0DMV8 641 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 HSPA1BP0DMV9 641 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 INSRRP14616 1297 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 NELFEP18615 380 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 CDK9P50750 372 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 PSME3P61289 254 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 COG7P83436 770 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 TRIM25Q14258 630 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 DCAF6Q58WW2 860 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 GK5Q6ZS86 529 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 ZC3HC1Q86WB0 502 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 CENPLQ8N0S6 344 aaPredicted RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 PCDH20Q8N6Y1 951 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 TRIML2Q8N7C3 387 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 APOL2Q9BQE5 337 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 MLPHQ9BV36 600 aaPredicted RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 OSBPL11Q9BXB4 747 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 SPATC1LQ9H0A9 340 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 PCDHAC1Q9H158 963 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 LIN28AQ9H9Z2 209 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 SETD4Q9NVD3 440 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 SUCOQ9UBS9 1254 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 RUVBL2Q9Y230 463 aaKnown RBP10.34□□□□□ -0.75
CCDC36-201ENST00000296449 AKT3Q9Y243 479 aa10.34□□□□□ -0.75
CCDC36-201ENST00000296449 H3BNH8 94 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 ZBTB24O43167 697 aaPredicted RBP10.33□□□□□ -0.76
CCDC36-201ENST00000296449 TSPAN1O60635 241 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 PGK2P07205 417 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 CYP2B6P20813 491 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 DNAJB1P25685 340 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 NMBRP28336 390 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 CD68P34810 354 aaPredicted RBP10.33□□□□□ -0.76
CCDC36-201ENST00000296449 AVPR1AP37288 418 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 TUBA4AP68366 448 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 LPIN1Q14693 890 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 USP10Q14694 798 aaKnown RBP10.33□□□□□ -0.76
CCDC36-201ENST00000296449 GLRA4Q5JXX5 417 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 DHRS4L2Q6PKH6 230 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 MAMDC4Q6UXC1 1216 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 FBXO16Q8IX29 292 aaPredicted RBP10.33□□□□□ -0.76
CCDC36-201ENST00000296449 FAM149B1Q96BN6 582 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 MAELQ96JY0 434 aaKnown RBP10.33□□□□□ -0.76
CCDC36-201ENST00000296449 TSNARE1Q96NA8 513 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 BIRC8Q96P09 236 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 SLC29A1Q99808 456 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 OLAHQ9NV23 265 aa10.33□□□□□ -0.76
CCDC36-201ENST00000296449 MRGBPQ9NV56 204 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms