RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 RHOP08100 348 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 HNRNPA1P09651 372 aaKnown RBP eCLIP23.24■■□□□ 1.31
PTX3-201ENST00000295927 PGAM1P18669 254 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 PRKCHP24723 683 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 ETFBP38117 255 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 MAXP61244 160 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 ITKQ08881 620 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 GPR158Q5T848 1215 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 ADGRD1Q6QNK2 874 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 RBM23Q86U06 439 aaKnown RBP23.24■■□□□ 1.31
PTX3-201ENST00000295927 IPMKQ8NFU5 416 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 TBL1YQ9BQ87 522 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 NAT9Q9BTE0 207 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 SPON2Q9BUD6 331 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 SMG9Q9H0W8 520 aaKnown RBP23.24■■□□□ 1.31
PTX3-201ENST00000295927 NPY2RP49146 381 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 TMCO4Q5TGY1 634 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 TTC19Q6DKK2 380 aaPredicted RBP23.23■■□□□ 1.31
PTX3-201ENST00000295927 CXorf57Q6NSI4 855 aaKnown RBP23.23■■□□□ 1.31
PTX3-201ENST00000295927 TRMT10BQ6PF06 316 aaKnown RBP23.23■■□□□ 1.31
PTX3-201ENST00000295927 PGBD5Q8N414 524 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 HJURPQ8NCD3 748 aaPredicted RBP23.23■■□□□ 1.31
PTX3-201ENST00000295927 DCAKDQ8WVC6 231 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 TMA16Q96EY4 203 aaKnown RBP23.23■■□□□ 1.31
PTX3-201ENST00000295927 IMP4Q96G21 291 aaKnown RBP23.23■■□□□ 1.31
PTX3-201ENST00000295927 ZNF599Q96NL3 588 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 ZNF510Q9Y2H8 683 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 MIA3Q5JRA6 1907 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 LEFTY2O00292 366 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 XYLBO75191 536 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 PMPCBO75439 489 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 CREB1P16220 341 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 CDH17Q12864 832 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 TEAD2Q15562 447 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 CERCAMQ5T4B2 595 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 ZNF697Q5TEC3 545 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 SLC44A1Q8WWI5 657 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 SELENOSQ9BQE4 189 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 FICDQ9BVA6 458 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 SAMD15Q9P1V8 674 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 HCFC2Q9Y5Z7 792 aa23.23■■□□□ 1.31
PTX3-201ENST00000295927 AP3B1O00203 1094 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 KDELR3O43731 214 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 ADRA1AP35348 466 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 MDH1P40925 334 aaKnown RBP23.22■■□□□ 1.31
PTX3-201ENST00000295927 OXCT1P55809 520 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 GUCY1A3Q02108 690 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 NIPAL4Q0D2K0 466 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 SLC5A9Q2M3M2 681 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 RNF219Q5W0B1 726 aaPredicted RBP23.22■■□□□ 1.31
PTX3-201ENST00000295927 ADGRD2Q7Z7M1 963 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 BBS7Q8IWZ6 715 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 SRRM1Q8IYB3 904 aaKnown RBP23.22■■□□□ 1.31
PTX3-201ENST00000295927 CARNMT1Q8N4J0 409 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 CNOT10Q9H9A5 744 aaKnown RBP23.22■■□□□ 1.31
PTX3-201ENST00000295927 ATP13A1Q9HD20 1204 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 SMYD2Q9NRG4 433 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 MOCS1Q9NZB8 636 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 ARHGAP26Q9UNA1 814 aa23.22■■□□□ 1.31
PTX3-201ENST00000295927 TYW5A2RUC4 315 aaKnown RBP23.21■■□□□ 1.31
PTX3-201ENST00000295927 CXorf49A8MYA2 514 aaPredicted RBP23.21■■□□□ 1.31
PTX3-201ENST00000295927 SHOX2O60902 331 aaPredicted RBP23.21■■□□□ 1.31
PTX3-201ENST00000295927 TPH1P17752 444 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 GLDCP23378 1020 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 DDX6P26196 483 aaKnown RBP eCLIP23.21■■□□□ 1.31
PTX3-201ENST00000295927 DSC2Q02487 901 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 NR1H3Q13133 447 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 MPP3Q13368 585 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 CRYMQ14894 314 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 TRABD2AQ86V40 505 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 CTAGE3PQ8IX95 158 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 CMTM8Q8IZV2 173 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 MDM1Q8TC05 714 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 MRGPRX2Q96LB1 330 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 ACE2Q9BYF1 805 aaPredicted RBP23.21■■□□□ 1.31
PTX3-201ENST00000295927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.21■■□□□ 1.31
PTX3-201ENST00000295927 H0Y626 953 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 ATP9BO43861 1147 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 ALDH1A2O94788 518 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 KRT15P19012 456 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 CD86P42081 329 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 GNGT1P63211 74 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 NTHL1P78549 312 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 ARHGAP15Q53QZ3 475 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 FSCBQ5H9T9 825 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 DENND5AQ6IQ26 1287 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 KDELC1Q6UW63 502 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 CYS1Q717R9 158 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 PPM1NQ8N819 430 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 LEMD2Q8NC56 503 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 PBX4Q9BYU1 374 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 MUC3BQ9H195 1237 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 TASP1Q9H6P5 420 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 ZDHHC7Q9NXF8 308 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 ACTL7BQ9Y614 415 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 ACTL7AQ9Y615 435 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 CEP290O15078 2479 aa23.21■■□□□ 1.31
PTX3-201ENST00000295927 FAM159BA6NKW6 160 aa23.2■■□□□ 1.3
PTX3-201ENST00000295927 LUC7L3O95232 432 aaKnown RBP23.2■■□□□ 1.3
PTX3-201ENST00000295927 POLBP06746 335 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms