RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 EPAS1Q99814 870 aa13.65□□□□□ -0.22
PSMB4-201ENST00000290541 ZDHHC4Q9NPG8 344 aa13.65□□□□□ -0.22
PSMB4-201ENST00000290541 DNAI1Q9UI46 699 aa13.65□□□□□ -0.22
PSMB4-201ENST00000290541 INTS6Q9UL03 887 aaKnown RBP13.65□□□□□ -0.22
PSMB4-201ENST00000290541 FBN2P35556 2912 aa13.65□□□□□ -0.22
PSMB4-201ENST00000290541 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 A0A0D9SEW6 157 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 TYW5A2RUC4 315 aaKnown RBP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 PSTPIP1O43586 416 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 CLDN11O75508 207 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 KRT1P04264 644 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 KRT7P08729 469 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 CHRM1P11229 460 aaPredicted RBP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 ENGP17813 658 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 ERCC2P18074 760 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 CTNNA2P26232 953 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 CSKP41240 450 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 AMPD2Q01433 879 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 ZNF177Q13360 481 aaPredicted RBP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 CDH18Q13634 790 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 DPYSQ14117 519 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 LLGL1Q15334 1064 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 IFI16Q16666 785 aaKnown RBP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 FUT11Q495W5 492 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 LRRC38Q5VT99 294 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 ADIPOR2Q86V24 386 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 TP53INP2Q8IXH6 220 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 TERB1Q8NA31 727 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 KCTD6Q8NC69 237 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 SORCS1Q8WY21 1168 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 RNF25Q96BH1 459 aaPredicted RBP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 ALG14Q96F25 216 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 FCRL3Q96P31 734 aaPredicted RBP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 CSPG4P5Q96PW8 444 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 SLC2A11Q9BYW1 496 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 KLC2Q9H0B6 622 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 NOL6Q9H6R4 1146 aaKnown RBP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 POLR3BQ9NW08 1133 aaPredicted RBP13.64□□□□□ -0.23
PSMB4-201ENST00000290541 TMEM248Q9NWD8 314 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 GGA2Q9UJY4 613 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 AMFRQ9UKV5 643 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 SLC8A2Q9UPR5 921 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 TBC1D30Q9Y2I9 924 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 SLC27A6Q9Y2P4 619 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 NOTCH2Q04721 2471 aa13.64□□□□□ -0.23
PSMB4-201ENST00000290541 MYO18AQ92614 2054 aaKnown RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 A0A0A0MRY4 1105 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 TBC1D3BA6NDS4 549 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 WASH4PA8MWX3 477 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 H3BRJ5 948 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 DDX3YO15523 660 aaKnown RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 ZSCAN12O43309 604 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 APODP05090 189 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 RHOCP08134 193 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 PABPC1P11940 636 aaKnown RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 OR1E1P30953 314 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 CTNNA1P35221 906 aaKnown RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 GRIA2P42262 883 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 CTSOP43234 321 aaPredicted RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 HCAR3P49019 387 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 PEX5P50542 639 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 SEC13P55735 322 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 GRSF1Q12849 480 aaKnown RBP eCLIP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 ANKRD20A8PQ5CZ79 823 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 TRIM61Q5EBN2 209 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 ZFYVE27Q5T4F4 411 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 RNF219Q5W0B1 726 aaPredicted RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 AADACL2Q6P093 401 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 MFSD7Q6UXD7 560 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 PEX26Q7Z412 305 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 PQLC3Q8N755 202 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 RTL3Q8N8U3 475 aaKnown RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 OR7D4Q8NG98 312 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 PCDH19Q8TAB3 1148 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 ALG3Q92685 438 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 DCBLD2Q96PD2 775 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 HHIPQ96QV1 700 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 PSMB7Q99436 277 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 CALN1Q9BXU9 219 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 KIAA1522Q9P206 1035 aaPredicted RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 MBD1Q9UIS9 605 aaPredicted RBP13.63□□□□□ -0.23
PSMB4-201ENST00000290541 PCDHA3Q9Y5H8 950 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 OR51B4Q9Y5P0 310 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 FLNCQ14315 2725 aa13.63□□□□□ -0.23
PSMB4-201ENST00000290541 LRRD1A4D1F6 860 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 DAPK3O43293 454 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 DRD1P21728 446 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 GLDCP23378 1020 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 ACVRL1P37023 503 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 ARL4AP40617 200 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 DNA2P51530 1060 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 HNRNPDQ14103 355 aaKnown RBP13.62□□□□□ -0.23
PSMB4-201ENST00000290541 PDK2Q15119 407 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 PITRM1Q5JRX3 1037 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 MBLAC2Q68D91 279 aa13.62□□□□□ -0.23
PSMB4-201ENST00000290541 KATNAL2Q8IYT4 538 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms