RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ADRA1BP35368 520 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 CRHR2Q13324 411 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 ITIH4Q14624 930 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 AFTPHQ6ULP2 937 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 C7orf61Q8IZ16 206 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 CERS2Q96G23 380 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 PLK2Q9NYY3 685 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 SNX13Q9Y5W8 968 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 LIASO43766 372 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 LGR5O75473 907 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 GTF2E2P29084 291 aaKnown RBP18.76■□□□□ 0.59
PCDH1-201ENST00000287008 S100A5P33763 92 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 RPS7P62081 194 aaKnown RBP18.76■□□□□ 0.59
PCDH1-201ENST00000287008 COLGALT2Q8IYK4 626 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 UPF1Q92900 1129 aaKnown RBP eCLIP18.76■□□□□ 0.59
PCDH1-201ENST00000287008 LGMNQ99538 433 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 PRRG3Q9BZD7 231 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 PDZD7Q9H5P4 517 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.76■□□□□ 0.59
PCDH1-201ENST00000287008 A0A087X1B8 175 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 FZD9O00144 591 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 SH3BGRLO75368 114 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 H2AFXP16104 143 aaPredicted RBP18.76■□□□□ 0.59
PCDH1-201ENST00000287008 ABCG1P45844 678 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 CLCN5P51795 746 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 CDK20Q8IZL9 346 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 CAMKK1Q8N5S9 505 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 HDAC7Q8WUI4 952 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 BSNDQ8WZ55 320 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 ENTPD4Q9Y227 616 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 RPTORQ8N122 1335 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 PAGE1O75459 146 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 PIRTP0C851 137 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 ADCK1Q86TW2 530 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 NAT16Q8N8M0 369 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 BRI3BPQ8WY22 251 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 STARD8Q92502 1023 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 CATSPER2Q96P56 530 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 PTPRHQ9HD43 1115 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 NDUFAF1Q9Y375 327 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 RGS14O43566 566 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 PPP1R15BQ5SWA1 713 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 SCUBE1Q8IWY4 988 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 MYO9BQ13459 2157 aa18.76■□□□□ 0.59
PCDH1-201ENST00000287008 GPR25O00155 361 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 RAD23AP54725 363 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 CRADDP78560 199 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 KYQ8NBH2 561 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 SELENOMQ8WWX9 145 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 COPS8Q99627 209 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 ST6GALNAC4Q9H4F1 302 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 SOHLH2Q9NX45 425 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 ZNHIT2Q9UHR6 403 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 M0R3G1 203 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 FGF1P05230 155 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 LTA4HP09960 611 aaKnown RBP18.75■□□□□ 0.59
PCDH1-201ENST00000287008 HSPA13P48723 471 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 NEDD8-MDP1E9PL57 170 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 WDR47O94967 919 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 FTH1P02794 183 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 PTPN20Q4JDL3 420 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 FAM45BPQ6NSW5 357 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 AADACL2Q6P093 401 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 FAM45AQ8TCE6 357 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 SPPL2AQ8TCT8 520 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 B3GNT5Q9BYG0 378 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 KLQ9UEF7 1012 aa18.75■□□□□ 0.59
PCDH1-201ENST00000287008 VPS4BO75351 444 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 NFATC1O95644 943 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 ATP6V1B2P21281 511 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 MMP8P22894 467 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 KELP23276 732 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 S100A3P33764 101 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 VAC14Q08AM6 782 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 MPPE1Q53F39 396 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 TTC33Q6PID6 262 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-201ENST00000287008 DNAJC14Q6Y2X3 702 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-201ENST00000287008 NSMCE2Q96MF7 247 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 GPSM3Q9Y4H4 160 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 NCANO14594 1321 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 hCG_1818297A0A087WSY0 165 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 MAN1A2O60476 641 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 CCDC166P0CW27 439 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 TCEA2Q15560 299 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 PFKFB4Q16877 469 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 LRRC23Q53EV4 343 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-201ENST00000287008 INTS6LQ5JSJ4 861 aaKnown RBP18.74■□□□□ 0.59
PCDH1-201ENST00000287008 IFNL1Q8IU54 200 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 C1orf127Q8N9H9 656 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 ATG16L2Q8NAA4 619 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 SEMA4DQ92854 862 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 POMKQ9H5K3 350 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 ALG9Q9H6U8 611 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 BPIFA1Q9NP55 256 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 C3P01024 1663 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 A0A1W2PQH9 124 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 SYN3O14994 580 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 CILPO75339 1184 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 CYP3A5P20815 502 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 WNT3AP56704 352 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms