RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 DCAKDQ8WVC6 231 aa11.18□□□□□ -0.62
GGPS1-201ENST00000282841 TMEM109Q9BVC6 243 aa11.18□□□□□ -0.62
GGPS1-201ENST00000282841 GLOD4Q9HC38 313 aa11.18□□□□□ -0.62
GGPS1-201ENST00000282841 TLR9Q9NR96 1032 aa11.18□□□□□ -0.62
GGPS1-201ENST00000282841 EURLQ9NYK6 297 aa11.18□□□□□ -0.62
GGPS1-201ENST00000282841 CFAP97Q9P2B7 532 aa11.18□□□□□ -0.62
GGPS1-201ENST00000282841 IGLV3-10A0A075B6K4 115 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 WDR91A4D1P6 747 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 SDR42E2A6NKP2 422 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 TBL1XO60907 577 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 AP2A1O95782 977 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 MAGEA6P43360 314 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 COG7P83436 770 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 SLC5A9Q2M3M2 681 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 POTEHQ6S545 545 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 ADGRD2Q7Z7M1 963 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 UMODL1-AS1Q8N2C9 162 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 MCUQ8NE86 351 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 PDZD8Q8NEN9 1154 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 AGAP2Q99490 1192 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 SLC46A2Q9BY10 475 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 TRABDQ9H4I3 376 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 RXFP1Q9HBX9 757 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 MAN1C1Q9NR34 630 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 C1QAP02745 245 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 IVLP07476 585 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 ABHD2P08910 425 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 MZF1P28698 734 aaPredicted RBP11.17□□□□□ -0.62
GGPS1-201ENST00000282841 MMP13P45452 471 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 RING1Q06587 406 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 MARC1Q5VT66 337 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 AFMIDQ63HM1 303 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 KCTD11Q693B1 232 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 LRRC8BQ6P9F7 803 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 BBS7Q8IWZ6 715 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 HERVK_113Q902F9 699 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 ZNF669Q96BR6 464 aaPredicted RBP11.17□□□□□ -0.62
GGPS1-201ENST00000282841 SERAC1Q96JX3 654 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 NSMCE3Q96MG7 304 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 CYTH2Q99418 400 aa11.17□□□□□ -0.62
GGPS1-201ENST00000282841 HBS1LQ9Y450 684 aaKnown RBP11.17□□□□□ -0.62
GGPS1-201ENST00000282841 DRGXA6NNA5 263 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 H3BNC9 293 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 SLC4A1P02730 911 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 NMBRP28336 390 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 RPA3P35244 121 aaPredicted RBP11.16□□□□□ -0.62
GGPS1-201ENST00000282841 RGRP47804 291 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 SKOR1P84550 965 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 SEPT6Q14141 434 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 PTPRCAPQ14761 206 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 TNFAIP8L3Q5GJ75 292 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 PPM1LQ5SGD2 360 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 ADGRF1Q5T601 910 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 RNF219Q5W0B1 726 aaPredicted RBP11.16□□□□□ -0.62
GGPS1-201ENST00000282841 TMC8Q8IU68 726 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 OR6K2Q8NGY2 324 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 BCAS4Q8TDM0 211 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 IL12RB2Q99665 862 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 MUC3BQ9H195 1237 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 XAB2Q9HCS7 855 aaKnown RBP11.16□□□□□ -0.62
GGPS1-201ENST00000282841 FNIP2Q9P278 1114 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 PSMC3IPQ9P2W1 217 aaPredicted RBP11.16□□□□□ -0.62
GGPS1-201ENST00000282841 SLC2A6Q9UGQ3 507 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 YBX2Q9Y2T7 364 aaKnown RBP11.16□□□□□ -0.62
GGPS1-201ENST00000282841 IKBKGQ9Y6K9 419 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 BRWD1Q9NSI6 2320 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 ANKRD65E5RJM6 399 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 INHBAP08476 426 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 CLCN4P51793 760 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 SERINC3Q13530 473 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 CRYMQ14894 314 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 TEAD2Q15562 447 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 GRASPQ7Z6J2 395 aaPredicted RBP11.16□□□□□ -0.62
GGPS1-201ENST00000282841 TRABD2AQ86V40 505 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 LZTR1Q8N653 840 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 ZSWIM3Q96MP5 696 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 TSGA13Q96PP4 275 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 NOTCH4Q99466 2003 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 FSD1LQ9BXM9 530 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 LRRC3Q9BY71 257 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 SLC13A1Q9BZW2 595 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.16□□□□□ -0.62
GGPS1-201ENST00000282841 INTS9Q9NV88 658 aaKnown RBP11.16□□□□□ -0.62
GGPS1-201ENST00000282841 ETAA1Q9NY74 926 aa11.16□□□□□ -0.62
GGPS1-201ENST00000282841 H0Y626 953 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 K7ERQ8 282 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 EIF3HO15372 352 aaKnown RBP eCLIP11.15□□□□□ -0.62
GGPS1-201ENST00000282841 MT-CO1P00395 513 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 C1RP00736 705 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 MAGEA10P43363 369 aaPredicted RBP11.15□□□□□ -0.62
GGPS1-201ENST00000282841 GNA12Q03113 381 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 QPCTQ16769 361 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 HSP90AA5PQ58FG0 334 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 SNX30Q5VWJ9 437 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 AP1ARQ63HQ0 302 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 ITPRIPL1Q6GPH6 555 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 TADA2BQ86TJ2 420 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 DYDC1Q8WWB3 177 aa11.15□□□□□ -0.62
GGPS1-201ENST00000282841 MRPS31Q92665 395 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms