RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 RFTN1Q14699 578 aaPredicted RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 PCLAFQ15004 111 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 NADK2Q4G0N4 442 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CYP4A22Q5TCH4 519 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 IRAK1BP1Q5VVH5 260 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 EPGNQ6UW88 154 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 C16orf89Q6UX73 402 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 DENND5BQ6ZUT9 1274 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CDKL3Q8IVW4 592 aaPredicted RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 MAP7D3Q8IWC1 876 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 HACE1Q8IYU2 909 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 DEFB107AQ8IZN7 70 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 PPP1R14CQ8TAE6 165 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 URGCPQ8TCY9 931 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 GAB3Q8WWW8 586 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ATP2A3Q93084 1043 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 NMD3Q96D46 503 aaKnown RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 GAD1Q99259 594 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 TBCBQ99426 244 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ADPGKQ9BRR6 497 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CNPY3Q9BT09 278 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 SLC13A1Q9BZW2 595 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 RIMS3Q9UJD0 308 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ADAM28Q9UKQ2 775 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 GIT1Q9Y2X7 761 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 PCDHB12Q9Y5F1 795 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CDY1Q9Y6F8 540 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 COL6A3P12111 3177 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 PLXNA4Q9HCM2 1894 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ITM2AO43736 263 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 OR6B1O95007 311 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 CRTAMO95727 393 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 POMCP01189 267 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 KITP10721 976 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 DNAJB1P25685 340 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 PMLP29590 882 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 HDAC4P56524 1084 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 SMTNL2Q2TAL5 461 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 CCDC153Q494R4 210 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 KCNT2Q6UVM3 1135 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ZNF534Q76KX8 674 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ZNF280BQ86YH2 543 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 CPSF7Q8N684 471 aaKnown RBP10.51□□□□□ -0.73
UPF3B-201ENST00000276201 METTL25Q8N6Q8 603 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 PLD5Q8N7P1 536 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 MRPL38Q96DV4 380 aaKnown RBP10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ZBTB45Q96K62 511 aaPredicted RBP10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ZNF558Q96NG5 402 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 SMYD3Q9H7B4 428 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 PRDM16Q9HAZ2 1276 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 MIOSQ9NXC5 875 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 SNTG2Q9NY99 539 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 UBAP1Q9NZ09 502 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 KLK14Q9P0G3 267 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 MARCOQ9UEW3 520 aaPredicted RBP10.51□□□□□ -0.73
UPF3B-201ENST00000276201 PRSS51A0A1B0GVH4 220 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 TTC36A6NLP5 189 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 H7C0C1 242 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 TOM1L1O75674 476 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 RECQL4O94761 1208 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 FAM58BPP0C7Q3 252 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 THRAP10827 490 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 GLDCP23378 1020 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 SERPINB6P35237 376 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ASPAP45381 313 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ATP5OP48047 213 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ALDH3B2P48448 385 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 SCNN1GP51170 649 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 EPHB1P54762 984 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 BCAR1P56945 870 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 KLF10Q13118 480 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 SEMA5AQ13591 1074 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 CAMK1Q14012 370 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 DUOXA2Q1HG44 320 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 GRAMD1BQ3KR37 738 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 BOLA3Q53S33 107 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ACBD5Q5T8D3 534 aaPredicted RBP10.51□□□□□ -0.73
UPF3B-201ENST00000276201 MPZL3Q6UWV2 235 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ZBTB33Q86T24 672 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 ERI1Q8IV48 349 aaKnown RBP10.51□□□□□ -0.73
UPF3B-201ENST00000276201 SPPL3Q8TCT6 385 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 HAUS8Q9BT25 410 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 BCO2Q9BYV7 579 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 CXCL16Q9H2A7 254 aa10.51□□□□□ -0.73
UPF3B-201ENST00000276201 EIF2B3Q9NR50 452 aaKnown RBP10.51□□□□□ -0.73
UPF3B-201ENST00000276201 HNRNPRO43390 633 aaKnown RBP10.5□□□□□ -0.73
UPF3B-201ENST00000276201 AVILO75366 819 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 FGF18O76093 207 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 DDHD2O94830 711 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 CST3P01034 146 aaPredicted RBP10.5□□□□□ -0.73
UPF3B-201ENST00000276201 PRKCGP05129 697 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 MCF2P10911 925 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 MYBPC1Q00872 1141 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 BMPR2Q13873 1038 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 DPYSQ14117 519 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 CCDC85BQ15834 202 aaPredicted RBP10.5□□□□□ -0.73
UPF3B-201ENST00000276201 CNGA3Q16281 694 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 MYLK3Q32MK0 819 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 KCNT1Q5JUK3 1230 aa10.5□□□□□ -0.73
UPF3B-201ENST00000276201 N4BP2L1Q5TBK1 243 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms