RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ATP5BP06576 529 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 DUX4L2P0CJ85 424 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 DUX4L3P0CJ86 424 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 DUX4L4P0CJ87 422 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 DUX4L5P0CJ88 424 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 DUX4L6P0CJ89 424 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 DUX4L7P0CJ90 424 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 PAICSP22234 425 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 WASHC2DQ5SRD0 308 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 DDI2Q5TDH0 399 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 LLGL2Q6P1M3 1020 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 KYAT3Q6YP21 454 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 POMGNT2Q8NAT1 580 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 DNAJB14Q8TBM8 379 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 ACO2Q99798 780 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 SLC25A23Q9BV35 468 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 SPRTNQ9H040 489 aaPredicted RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 EPS8L2Q9H6S3 715 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 NDUFA13Q9P0J0 144 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 DUX4Q9UBX2 424 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 TNFSF13BQ9Y275 285 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 ZC3H13Q5T200 1668 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 ATP6AP2A0A1C7CYW4 349 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 ATP6AP2O75787 350 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 BCL10O95999 233 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 VAV1P15498 845 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 CTPS1P17812 591 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 ITGB5P18084 799 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 CD52P31358 61 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 MARSP56192 900 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 CTBP1Q13363 440 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 ARMC4Q5T2S8 1044 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 PRR23CQ6ZRP0 262 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 NEK10Q6ZWH5 1172 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 MYLPFQ96A32 169 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 CERS2Q96G23 380 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 RNF157Q96PX1 679 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 MYOCQ99972 504 aa11.61□□□□□ -0.55
USP53-201ENST00000274030 MRPL17Q9NRX2 175 aaKnown RBP11.61□□□□□ -0.55
USP53-201ENST00000274030 LMTK2Q8IWU2 1503 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 BCL9O00512 1426 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 ANKDD1BA6NHY2 528 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 CDK7P50613 346 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 RAB14P61106 215 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 HECTD3Q5T447 861 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 CNSTQ6PJW8 725 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 ZDHHC13Q8IUH4 622 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 FAM71AQ8IYT1 594 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 CSGALNACT1Q8TDX6 532 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 KCTD4Q8WVF5 259 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 C2orf49Q9BVC5 232 aaPredicted RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 SERHL2Q9H4I8 314 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 SERHLQ9NQF3 203 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 LRRC10BA6NIK2 292 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 TBL1XO60907 577 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 LTA4HP09960 611 aaKnown RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 IDH2P48735 452 aaKnown RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 MMP14P50281 582 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 HK2P52789 917 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 PRMT9Q6P2P2 845 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 C11orf88Q6PI97 169 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 CCDC149Q6ZUS6 474 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 RGL4Q8IZJ4 473 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 OR52K2Q8NGK3 314 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 REXO4Q9GZR2 422 aaKnown RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 KLHL3Q9UH77 587 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 SLC9A8Q9Y2E8 581 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 ATXN2Q99700 1313 aaKnown RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 A0A087X1B8 175 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 YDJCA8MPS7 323 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 MYBL2P10244 700 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 ALADP13716 330 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 TFEBP19484 476 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 DGKAP23743 735 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 THOP1P52888 689 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 ECM1Q16610 540 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 ZIK1Q3SY52 487 aaPredicted RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 SAMD4BQ5PRF9 694 aaKnown RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 DSG4Q86SJ6 1040 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 DHRSXQ8N5I4 330 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 PRELID2Q8N945 189 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 PROX1Q92786 737 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 UGT2B28Q9BY64 529 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 FHDC1Q9C0D6 1143 aaPredicted RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 BTBD7Q9P203 1132 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 ZNHIT2Q9UHR6 403 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 LYVE1Q9Y5Y7 322 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 ASTN2O75129 1339 aaPredicted RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 WNT7AO00755 349 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 CYP1A2P05177 515 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 PRKCIP41743 596 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 GALNT3Q14435 633 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 C16orf72Q14CZ0 275 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 UNC93AQ86WB7 457 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 STAG3L4Q8TBR4 150 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 MAGEE2Q8TD90 523 aaPredicted RBP11.6□□□□□ -0.55
USP53-201ENST00000274030 RORBQ92753 470 aa11.6□□□□□ -0.55
USP53-201ENST00000274030 ARMC7Q9H6L4 198 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms