RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CDRT15Q96T59 188 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 C3orf18Q9UK00 162 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 MICAL2O94851 1124 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SERPINA6P08185 405 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PAX7P23759 505 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ADSLP30566 484 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 POLD2P49005 469 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SCNN1BP51168 640 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 AFTPHQ6ULP2 937 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PPP1R16AQ96I34 528 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 FAIM2Q9BWQ8 316 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 MRPL9Q9BYD2 267 aaKnown RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ASB7Q9H672 318 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PRDM8Q9NQV8 689 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 DDX18Q9NVP1 670 aaKnown RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 RBM22Q9NW64 420 aaKnown RBP eCLIP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 BBIP1A8MTZ0 92 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TCF4P15884 667 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 YY1P25490 414 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 RAB2AP61019 212 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ACSM2AQ08AH3 577 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 GNASQ5JWF2 1037 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ANGEL2Q5VTE6 544 aaKnown RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ACSM2BQ68CK6 577 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 GALNT18Q6P9A2 607 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 EMC1Q8N766 993 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SYT15Q9BQS2 421 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SLC9A8Q9Y2E8 581 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PCDHGA4Q9Y5G9 962 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 CCL15-CCL14A0A0B4J2E2 113 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 NDUFB5O43674 189 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 MGAT1P26572 445 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 CCL15Q16663 113 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 AMHR2Q16671 573 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 USP45Q70EL2 814 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ZSCAN18Q8TBC5 510 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SH2D3AQ9BRG2 576 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 DMTF1Q9Y222 760 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PCDHB12Q9Y5F1 795 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SPEF2Q9C093 1822 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 FAM92AA1XBS5 289 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 COX4I1P13073 169 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PECAM1P16284 738 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PAX3P23760 479 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TTPAP49638 278 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TUBP50607 506 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ROR2Q01974 943 aaKnown RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TBX2Q13207 712 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF662Q6ZS27 426 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 METTL6Q8TCB7 284 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 CKAP2Q8WWK9 683 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 CD101Q93033 1021 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 LRMDAQ9H2I8 198 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TAF6LQ9Y6J9 622 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 EVPLQ92817 2033 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ITGB3BPQ13352 177 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TXNDC11Q6PKC3 985 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 GJD3Q8N144 294 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 LRRC17Q8N6Y2 441 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TAS1R2Q8TE23 839 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TATDN2Q93075 761 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 HAVCR1Q96D42 359 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TMEM39BQ9GZU3 492 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TFR2Q9UP52 801 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PCDHB5Q9Y5E4 795 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 C1orf167Q5SNV9 1468 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TPP1O14773 563 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 DCXO43602 365 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 ERN1O75460 977 aaKnown RBP8.07□□□□□ -1.12
LIMD1-201ENST00000273317 B3GAT3O94766 335 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 TOB1P50616 345 aaPredicted RBP8.07□□□□□ -1.12
LIMD1-201ENST00000273317 PTAR1Q7Z6K3 402 aaPredicted RBP8.07□□□□□ -1.12
LIMD1-201ENST00000273317 FAM131BQ86XD5 332 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 ATG4CQ96DT6 458 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 RAPGEFL1Q9UHV5 662 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 ST3GAL5Q9UNP4 418 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 C2CD2Q9Y426 696 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 DISP2A7MBM2 1401 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 SNAP23O00161 211 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 UNC5CO95185 931 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 TLX1P31314 330 aaPredicted RBP8.07□□□□□ -1.12
LIMD1-201ENST00000273317 PUDPQ08623 228 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 ZNHIT3Q15649 155 aaPredicted RBP8.07□□□□□ -1.12
LIMD1-201ENST00000273317 PLEKHH3Q7Z736 793 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 GATAD2AQ86YP4 633 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 FBXW8Q8N3Y1 598 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 BTN3A1O00481 513 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 MYL9P24844 172 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 BTN2A1Q7KYR7 527 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 TCF12Q99081 682 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 RIOX1Q9H6W3 641 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 PHF11Q9UIL8 331 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF232Q9UNY5 417 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 UMODL1Q5DID0 1318 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 KHDRBS3O75525 346 aaKnown RBP8.07□□□□□ -1.12
LIMD1-201ENST00000273317 OLR1P78380 273 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 SGCGQ13326 291 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 DPYSL3Q14195 570 aa8.07□□□□□ -1.12
LIMD1-201ENST00000273317 OVOS1Q6IE37 1185 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms