RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 H3BMM5 538 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 O00370 1275 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 CDH16O75309 829 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SOAT2O75908 522 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SEMA3DO95025 777 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 IDSP22304 550 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 LRPAP1P30533 357 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 MC1RQ01726 317 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 LMAN2Q12907 356 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 FOXD4Q12950 439 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 RRP1BQ14684 758 aaKnown RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 CCL14Q16627 93 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 ZNF564Q8TBZ8 553 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 HDAC7Q8WUI4 952 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SERAC1Q96JX3 654 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SPASTQ9UBP0 616 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 AMACRQ9UHK6 382 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 PHTF1Q9UMS5 762 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 TIMM13Q9Y5L4 95 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 ABCA3Q99758 1704 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 FAM25AB3EWG3 89 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 FAM25CB3EWG5 89 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 FAM25GB3EWG6 89 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SNPHO15079 494 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 ZNF185O15231 689 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 CLASP2O75122 1294 aaKnown RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 ALPPP05187 535 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 ENO3P13929 434 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 ATP6V1C1P21283 382 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 RPS6KA3P51812 740 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 PLGLB1Q02325 96 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 CYP24A1Q07973 514 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 MTF1Q14872 753 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 TARBP2Q15633 366 aaKnown RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 CNGA2Q16280 664 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 IYDQ6PHW0 289 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SLFN11Q7Z7L1 901 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 RCOR2Q8IZ40 523 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 IPMKQ8NFU5 416 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 UBA3Q8TBC4 463 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 PPP1R13LQ8WUF5 828 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 PTPRN2Q92932 1015 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 INPP4AQ96PE3 977 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 PNKPQ96T60 521 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 ZNF518BQ9C0D4 1074 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 ALG13Q9NP73 1137 aaKnown RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 GDF3Q9NR23 364 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 DRG1Q9Y295 367 aaKnown RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 PADI2Q9Y2J8 665 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 ERCC1P07992 297 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 SPATA31D3P0C874 917 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 TM4SF4P48230 202 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 GHRHRQ02643 423 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 RALGDSQ12967 914 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 CBX3Q13185 183 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 HABP4Q5JVS0 413 aaKnown RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 LYPLAL1Q5VWZ2 237 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SPATA31D4Q6ZUB0 917 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 GALNT13Q8IUC8 556 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 FUKQ8N0W3 1084 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 MRPL48Q96GC5 212 aaKnown RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 VPS11Q9H270 941 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 HAO1Q9UJM8 370 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 USP54Q70EL1 1684 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SOWAHBA6NEL2 793 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 ALPIP09923 528 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 ZNF7P17097 686 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 ITGB5P18084 799 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 GPD2P43304 727 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 TOB1P50616 345 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 ABCE1P61221 599 aaKnown RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 TUBA4AP68366 448 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 RGS21Q2M5E4 152 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 KLHL12Q53G59 568 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 WASHC2DQ5SRD0 308 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 ARMC3Q5W041 872 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 CENPPQ6IPU0 288 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 VITQ6UXI7 678 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 P4HA3Q7Z4N8 544 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 PPM1NQ8N819 430 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 OR10G6Q8NH81 332 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 LENG1Q96BZ8 264 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 PRDM16Q9HAZ2 1276 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 MORF4L1Q9UBU8 362 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 L1RE1Q9UN81 338 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 NT5C1B-RDH14C9J2C7 533 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 NPC1O15118 1278 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 FGF18O76093 207 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 TNFP01375 233 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 FAM58BPP0C7Q3 252 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SOX6P35712 828 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 MASP1P48740 699 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 SPIRE1Q08AE8 756 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 TTC23Q5W5X9 447 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 ZNF776Q68DI1 518 aaPredicted RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 CWF19L1Q69YN2 538 aaKnown RBP7.93□□□□□ -1.14
USP3-201ENST00000268049 TTC7BQ86TV6 843 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 TAGAPQ8N103 731 aa7.93□□□□□ -1.14
USP3-201ENST00000268049 NOA1Q8NC60 698 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms