RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 KDELC1Q6UW63 502 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 TAOK1Q7L7X3 1001 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 DCAKDQ8WVC6 231 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 SLC44A1Q8WWI5 657 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 PABPC5Q96DU9 382 aaKnown RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 TCEAL4Q96EI5 215 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 PAFAH2Q99487 392 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 TRIM56Q9BRZ2 755 aaKnown RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 TASP1Q9H6P5 420 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 CNOT10Q9H9A5 744 aaKnown RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 NT5MQ9NPB1 228 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 PIH1D1Q9NWS0 290 aaKnown RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 BFARQ9NZS9 450 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 DPP7Q9UHL4 492 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 FAM159BA6NKW6 160 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 LEFTY2O00292 366 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 XYLBO75191 536 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 NEBLO76041 1014 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 ETFBP38117 255 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 PBX2P40425 430 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 MSH2P43246 934 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 CRADDP78560 199 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 NIPAL4Q0D2K0 466 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 CDH17Q12864 832 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 MPP3Q13368 585 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 FRG1Q14331 258 aaKnown RBP16.64■□□□□ 0.25
TPM1-201ENST00000267996 PRSS36Q5K4E3 855 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 GPR158Q5T848 1215 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 RNF43Q68DV7 783 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 DENND5AQ6IQ26 1287 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 RANBP10Q6VN20 620 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 ZNF354CQ86Y25 554 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 PGBD5Q8N414 524 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 ZNF707Q96C28 371 aaPredicted RBP16.64■□□□□ 0.25
TPM1-201ENST00000267996 TMA16Q96EY4 203 aaKnown RBP16.64■□□□□ 0.25
TPM1-201ENST00000267996 MRGPRX2Q96LB1 330 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 TBL1YQ9BQ87 522 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 PRKD2Q9BZL6 878 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 VPS45Q9NRW7 570 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 TBK1Q9UHD2 729 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 SH3BP1Q9Y3L3 701 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 HCFC2Q9Y5Z7 792 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 CEP290O15078 2479 aa16.64■□□□□ 0.25
TPM1-201ENST00000267996 HELZP42694 1942 aaKnown RBP16.64■□□□□ 0.25
TPM1-201ENST00000267996 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.63■□□□□ 0.25
TPM1-201ENST00000267996 MAGEB16A2A368 324 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 TBL1XO60907 577 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 MMP2P08253 660 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 TMED2Q15363 201 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 TEAD2Q15562 447 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 ALG1LQ6GMV1 187 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 CASC4Q6P4E1 433 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 ZNF449Q6P9G9 518 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 TRMT10BQ6PF06 316 aaKnown RBP16.63■□□□□ 0.25
TPM1-201ENST00000267996 TMEM135Q86UB9 458 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 TRABD2AQ86V40 505 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 CCDC117Q8IWD4 279 aaPredicted RBP16.63■□□□□ 0.25
TPM1-201ENST00000267996 CMTM8Q8IZV2 173 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 DNAAF3Q8N9W5 541 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 ARRDC2Q8TBH0 407 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 TTC17Q96AE7 1141 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 ABHD8Q96I13 439 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 APOL2Q9BQE5 337 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 CAPS2Q9BXY5 557 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 IL22Q9GZX6 179 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 LMAN2LQ9H0V9 348 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 ARNT2Q9HBZ2 717 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 SMYD2Q9NRG4 433 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 OR51B4Q9Y5P0 310 aa16.63■□□□□ 0.25
TPM1-201ENST00000267996 E2F8A0AVK6 867 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 CXorf49A8MYA2 514 aaPredicted RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 SCAMP3O14828 347 aaKnown RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 PER2O15055 1255 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 LUC7L3O95232 432 aaKnown RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 MDH1P40925 334 aaKnown RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 OXCT1P55809 520 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 IHHQ14623 411 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 RFTN1Q14699 578 aaPredicted RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 CRYMQ14894 314 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 SLC5A9Q2M3M2 681 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 ARHGAP15Q53QZ3 475 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 SPANXN3Q5MJ09 141 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 MPP7Q5T2T1 576 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 CERCAMQ5T4B2 595 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 IL31Q6EBC2 164 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 BBS7Q8IWZ6 715 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 IPMKQ8NFU5 416 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 MZB1Q8WU39 189 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 SPON2Q9BUD6 331 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 FICDQ9BVA6 458 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 PBX4Q9BYU1 374 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 ATP13A1Q9HD20 1204 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 ZMYM5Q9UJ78 669 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 ZNF180Q9UJW8 692 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 FAM237BA0A1B0GVD1 139 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 TYW5A2RUC4 315 aaKnown RBP16.62■□□□□ 0.25
TPM1-201ENST00000267996 FOXO6A8MYZ6 492 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 PMPCBO75439 489 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 PIAS1O75925 651 aa16.62■□□□□ 0.25
TPM1-201ENST00000267996 CREB1P16220 341 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms