RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 JCHAINP01591 159 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 HNRNPLP14866 589 aaKnown RBP eCLIP17.17■□□□□ 0.34
RTN1-201ENST00000267484 RPL5P46777 297 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 MAP3K7CLP57077 242 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 PAFAH1B3Q15102 231 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 LRRC23Q53EV4 343 aaPredicted RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 LIPMQ5VYY2 423 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 RP9Q8TA86 221 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 SREK1Q8WXA9 508 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 KCNU1A8MYU2 1149 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 HNRNPRO43390 633 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 DLX3O60479 287 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 CYP2B6P20813 491 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 PCSK6P29122 969 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 TPI1P60174 286 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 GRIK4Q16099 956 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 IL23RQ5VWK5 629 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 ZYG11AQ6WRX3 759 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 CEP97Q8IW35 865 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 CRYBG2Q8N1P7 616 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 NXNL1Q96CM4 212 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 PRPF19Q9UMS4 504 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 CDYLQ9Y232 598 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 MT-CO1P00395 513 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 SLC35E2BP0CK96 405 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 NT5DC4Q86YG4 428 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 MFSD6LQ8IWD5 586 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 CENPLQ8N0S6 344 aaPredicted RBP17.16■□□□□ 0.34
RTN1-201ENST00000267484 GRIN3AQ8TCU5 1115 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 LRRC4Q9HBW1 653 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 TLL2Q9Y6L7 1015 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 YJEFN3A6XGL0 299 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 AHSGP02765 367 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 FYNP06241 537 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 ME2P23368 584 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 ACADSBP45954 432 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 RALGDSQ12967 914 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 POU6F1Q14863 301 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 KYAT1Q16773 422 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 OLFML2BQ68BL8 750 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 IL31Q6EBC2 164 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 ZC3HC1Q86WB0 502 aaKnown RBP17.16■□□□□ 0.34
RTN1-201ENST00000267484 B3GALNT2Q8NCR0 500 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 APPL2Q8NEU8 664 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 EDEM1Q92611 657 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 HSFY1Q96LI6 401 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
RTN1-201ENST00000267484 RCOR3Q9P2K3 495 aaPredicted RBP17.16■□□□□ 0.34
RTN1-201ENST00000267484 TIMM44O43615 452 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 VAPBO95292 243 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 ASLP04424 464 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 NOS2P35228 1153 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 ADRA1BP35368 520 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 TKTL1P51854 596 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 USP46P62068 366 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 KCTD11Q693B1 232 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 SIX6OS1Q8N1H7 587 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 LRRC52Q8N7C0 313 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 PDCD6IPQ8WUM4 868 aaKnown RBP17.15■□□□□ 0.34
RTN1-201ENST00000267484 WNT8BQ93098 351 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 MED10Q9BTT4 135 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 CYP4F12Q9HCS2 524 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 TCAF2A6NFQ2 919 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 AP1G1O43747 822 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 DAB1O75553 588 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 MT-CYBP00156 380 aaPredicted RBP17.15■□□□□ 0.34
RTN1-201ENST00000267484 NSUN2Q08J23 767 aaKnown RBP eCLIP17.15■□□□□ 0.34
RTN1-201ENST00000267484 MAP7Q14244 749 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 DGKDQ16760 1214 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 ANO4Q32M45 955 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 LAYNQ6UX15 382 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 MAMDC4Q6UXC1 1216 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 PAQR9Q6ZVX9 377 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 CNDP1Q96KN2 507 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 TNS1Q9HBL0 1735 aaKnown RBP17.15■□□□□ 0.34
RTN1-201ENST00000267484 ZBTB26Q9HCK0 441 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 IRAK4Q9NWZ3 460 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 GMPR2Q9P2T1 348 aaKnown RBP17.15■□□□□ 0.34
RTN1-201ENST00000267484 HEMK1Q9Y5R4 338 aaPredicted RBP17.15■□□□□ 0.34
RTN1-201ENST00000267484 SMIM28A0A1B0GU29 152 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 SLC25A27O95847 323 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 PGK1P00558 417 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 SH2D4BQ5SQS7 431 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 TAPT1Q6NXT6 567 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 SLC27A1Q6PCB7 646 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 ARHGAP36Q6ZRI8 547 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 GPRIN1Q7Z2K8 1008 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 RNF135Q8IUD6 432 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 PGAM4Q8N0Y7 254 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 ZNF512Q96ME7 567 aaPredicted RBP17.15■□□□□ 0.34
RTN1-201ENST00000267484 MRPL1Q9BYD6 325 aaKnown RBP17.15■□□□□ 0.34
RTN1-201ENST00000267484 ULBP1Q9BZM6 244 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 PREBQ9HCU5 417 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 GTSE1Q9NYZ3 720 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 HSFX1Q9UBD0 423 aa17.15■□□□□ 0.34
RTN1-201ENST00000267484 H3BSA7 217 aa17.14■□□□□ 0.33
RTN1-201ENST00000267484 XPO1O14980 1071 aaKnown RBP17.14■□□□□ 0.33
RTN1-201ENST00000267484 RPL34P49207 117 aaKnown RBP17.14■□□□□ 0.33
RTN1-201ENST00000267484 TSTD2Q5T7W7 516 aa17.14■□□□□ 0.33
RTN1-201ENST00000267484 CYP2R1Q6VVX0 501 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms