RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 ARHGEF3Q9NR81 526 aa17.16■□□□□ 0.34
CHKA-201ENST00000265689 TLR8Q9NR97 1041 aaKnown RBP17.16■□□□□ 0.34
CHKA-201ENST00000265689 ZNF358Q9NW07 568 aa17.16■□□□□ 0.34
CHKA-201ENST00000265689 CLIC5Q9NZA1 410 aa17.16■□□□□ 0.34
CHKA-201ENST00000265689 TANC1Q9C0D5 1861 aa17.16■□□□□ 0.34
CHKA-201ENST00000265689 FNDC1Q4ZHG4 1894 aaPredicted RBP17.15■□□□□ 0.34
CHKA-201ENST00000265689 SLC12A8A0AV02 714 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 PLIN3O60664 434 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 NEBLO76041 1014 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 CBX6O95503 412 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 HAPLN1P10915 354 aaPredicted RBP17.15■□□□□ 0.34
CHKA-201ENST00000265689 SKIV2L2P42285 1042 aaKnown RBP17.15■□□□□ 0.34
CHKA-201ENST00000265689 RPL10AP62906 217 aaKnown RBP17.15■□□□□ 0.34
CHKA-201ENST00000265689 OCRLQ01968 901 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 TRIP4Q15650 581 aaPredicted RBP17.15■□□□□ 0.34
CHKA-201ENST00000265689 SPPL2BQ8TCT7 592 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 ATP2A3Q93084 1043 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 C7orf26Q96N11 449 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 TMEM237Q96Q45 408 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 ZYG11BQ9C0D3 744 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 CAB39LQ9H9S4 337 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 TXLNGQ9NUQ3 528 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 TMEM216Q9P0N5 145 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 DCDC2Q9UHG0 476 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 BPTFQ12830 3046 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 J3KR12 359 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 PITPNM1O00562 1244 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 ADAM12O43184 909 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 KRT16P08779 473 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 MYL2P10916 166 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 RHOQP17081 205 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 ADRA1AP35348 466 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 GEMP55040 296 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 MPP3Q13368 585 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 STXBP5Q5T5C0 1151 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 FBXL22Q6P050 247 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 CIR1Q86X95 450 aaPredicted RBP17.15■□□□□ 0.34
CHKA-201ENST00000265689 UMODL1-AS1Q8N2C9 162 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 ATP6V0D2Q8N8Y2 350 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 ACVR1CQ8NER5 493 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 CCSER2Q9H7U1 834 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 TMEM39AQ9NV64 488 aa17.15■□□□□ 0.34
CHKA-201ENST00000265689 AP3B1O00203 1094 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 MGRN1O60291 552 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 PEX11BO96011 259 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 CSF2RAP15509 400 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 KCNA4P22459 653 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 SERPINB3P29508 390 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 MNAT1P51948 309 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 DLG2Q15700 870 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 CLNKQ7Z7G1 428 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 BTN2A3PQ96KV6 586 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 KLHL5Q96PQ7 755 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 TTPALQ9BTX7 342 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 FBXO6Q9NRD1 293 aaPredicted RBP17.14■□□□□ 0.33
CHKA-201ENST00000265689 MARCOQ9UEW3 520 aaPredicted RBP17.14■□□□□ 0.33
CHKA-201ENST00000265689 CDY1Q9Y6F8 540 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 TRIM43BA6NCK2 446 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 PROCP04070 461 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 KITP10721 976 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 CHRNA4P43681 627 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 NUMBP49757 651 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 STX3Q13277 289 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 PCID2Q5JVF3 399 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 PKN3Q6P5Z2 889 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 ANKRD33Q7Z3H0 272 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 ARID3BQ8IVW6 561 aaPredicted RBP17.14■□□□□ 0.33
CHKA-201ENST00000265689 PLD6Q8N2A8 252 aaKnown RBP17.14■□□□□ 0.33
CHKA-201ENST00000265689 TRIM43Q96BQ3 446 aaPredicted RBP17.14■□□□□ 0.33
CHKA-201ENST00000265689 MYEOVQ96EZ4 313 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 PRR11Q96HE9 360 aaPredicted RBP17.14■□□□□ 0.33
CHKA-201ENST00000265689 SPATA17Q96L03 361 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 MRGPRX2Q96LB1 330 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 TMEM248Q9NWD8 314 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 STK38LQ9Y2H1 464 aa17.14■□□□□ 0.33
CHKA-201ENST00000265689 H7C4K7 107 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 SNNO75324 88 aaPredicted RBP17.13■□□□□ 0.33
CHKA-201ENST00000265689 RPL17P18621 184 aaKnown RBP17.13■□□□□ 0.33
CHKA-201ENST00000265689 MAGEA12P43365 314 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 SERPINB8P50452 374 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 NDST2P52849 883 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 PCLAFQ15004 111 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 PCSK7Q16549 785 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 HSF5Q4G112 596 aaPredicted RBP17.13■□□□□ 0.33
CHKA-201ENST00000265689 MBLAC2Q68D91 279 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 LRRC49Q8IUZ0 686 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 FSD1LQ9BXM9 530 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 OLA1Q9NTK5 396 aaKnown RBP17.13■□□□□ 0.33
CHKA-201ENST00000265689 PPARGC1AQ9UBK2 798 aaKnown RBP17.13■□□□□ 0.33
CHKA-201ENST00000265689 IGLV3-10A0A075B6K4 115 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 FGF3P11487 239 aaPredicted RBP17.13■□□□□ 0.33
CHKA-201ENST00000265689 ATF6P18850 670 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 MAXP61244 160 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 DEFB103AP81534 67 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 SLC10A7Q0GE19 358 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 ELAVL2Q12926 359 aaKnown RBP17.13■□□□□ 0.33
CHKA-201ENST00000265689 CTC1Q2NKJ3 1217 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 ANO4Q32M45 955 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 ANKS3Q6ZW76 656 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 ZNF354CQ86Y25 554 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms