RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 AMIGO3Q86WK7 504 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 SNED1Q8TER0 1413 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 ABHD8Q96I13 439 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 CDRT15Q96T59 188 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 SH3BP4Q9P0V3 963 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 OPTCQ9UBM4 332 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 RGPD8O14715 1765 aaPredicted RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 DUSP11O75319 330 aaKnown RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 PAGE1O75459 146 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 APOA1P02647 267 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 PROCP04070 461 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 CCDC81Q6ZN84 652 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 DSG4Q86SJ6 1040 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 CACUL1Q86Y37 369 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 DAW1Q8N136 415 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 VPS33AQ96AX1 596 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 NSMCE2Q96MF7 247 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 STN1Q9H668 368 aaKnown RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 APOBEC3GQ9HC16 384 aaKnown RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 SEMA4BQ9NPR2 832 aaPredicted RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 FAM208AQ9UK61 1670 aaKnown RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 H3BMM5 538 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 PAPSS1O43252 624 aaPredicted RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 VPS4BO75351 444 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 PIRTP0C851 137 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 OCM2P0CE71 109 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 OCMP0CE72 109 aaPredicted RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 ME2P23368 584 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 ATP5F1P24539 256 aaPredicted RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 SGCGQ13326 291 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 PMF1Q6P1K2 205 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 PRMT9Q6P2P2 845 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 TRABD2AQ86V40 505 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 SLC4A11Q8NBS3 891 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 ASB8Q9H765 288 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 ARL15Q9NXU5 204 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 TBL1XO60907 577 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 TYMPP19971 482 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 DGKAP23743 735 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 ABL2P42684 1182 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 TJAP1Q5JTD0 557 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 NOL9Q5SY16 702 aaKnown RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 STXBP5Q5T5C0 1151 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 FAM45BPQ6NSW5 357 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 NKAPQ8N5F7 415 aaKnown RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 FAM45AQ8TCE6 357 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 TFAP2BQ92481 460 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 EXOC2Q96KP1 924 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 NDNQ99608 321 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 CORO1BQ9BR76 489 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 FAM126AQ9BYI3 521 aaPredicted RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 ASAH2Q9NR71 780 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 FBXO5Q9UKT4 447 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 ZBTB14O43829 449 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 DEAF1O75398 565 aaPredicted RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 OR1D2P34982 312 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 CDKN2BP42772 138 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 MAPK8P45983 427 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 SNRPD1P62314 119 aaKnown RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 PLCL1Q15111 1095 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 FNDC3BQ53EP0 1204 aaKnown RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 SWT1Q5T5J6 900 aaKnown RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 SNX30Q5VWJ9 437 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 DHFR2Q86XF0 187 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 SEPHS2Q99611 448 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 ACE2Q9BYF1 805 aaPredicted RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 BCAS3Q9H6U6 928 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 LRRC4CQ9HCJ2 640 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 PADI4Q9UM07 663 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 NALCNQ8IZF0 1738 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 CCDC154A6NI56 674 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 ACADMP11310 421 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 TFEBP19484 476 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 PIK3CGP48736 1102 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 WNT3AP56704 352 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 GBE1Q04446 702 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 SLC34A1Q06495 639 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 VAC14Q08AM6 782 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 DNAJC14Q6Y2X3 702 aaPredicted RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 SLC26A9Q7LBE3 791 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 FUKQ8N0W3 1084 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 PTGR2Q8N8N7 351 aaPredicted RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 GRIN3AQ8TCU5 1115 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 KCTD4Q8WVF5 259 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 NKD2Q969F2 451 aaPredicted RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 SIX2Q9NPC8 291 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 TNPO3Q9Y5L0 923 aaKnown RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 XRN1Q8IZH2 1706 aaKnown RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 INPP4BO15327 924 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 ASGR1P07306 291 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 FASP25445 335 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 RFX3P48380 749 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 TRAF2Q12933 501 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 FRG1Q14331 258 aaKnown RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 ACBD5Q5T8D3 534 aaPredicted RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 SLC24A5Q71RS6 500 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 ARCQ7LC44 396 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 C11orf74Q86VG3 221 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 PLD5Q8N7P1 536 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 SPPL2BQ8TCT7 592 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms