RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 RENBPP51606 427 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 RIPK1Q13546 671 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 CCDC153Q494R4 210 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 PPM1JQ5JR12 505 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 POTEHQ6S545 545 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 TFAP2DQ7Z6R9 452 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 FATE1Q969F0 183 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 SKA1Q96BD8 255 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 TTPALQ9BTX7 342 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 NOL6Q9H6R4 1146 aaKnown RBP13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 MYLKQ15746 1914 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 IGLV3-10A0A075B6K4 115 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 SLC12A8A0AV02 714 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 NT5C1B-RDH14C9J2C7 533 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 PMPCBO75439 489 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 ATP6V1G2O95670 118 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 TBX18O95935 607 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 SERPINB3P29508 390 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 ADRA1AP35348 466 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 RING1Q06587 406 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 MTA1Q13330 715 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 HNRNPDQ14103 355 aaKnown RBP13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 RTP2Q5QGT7 225 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 RASIP1Q5U651 963 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 CES4AQ5XG92 561 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 MBLAC2Q68D91 279 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 RSPO2Q6UXX9 243 aaPredicted RBP13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 CMC1Q7Z7K0 106 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 ARID3BQ8IVW6 561 aaPredicted RBP13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 AZIN2Q96A70 460 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 SLC25A51Q9H1U9 297 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 MRM3Q9HC36 420 aaKnown RBP13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 STK38LQ9Y2H1 464 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 HTTP42858 3142 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 SCN5AQ14524 2016 aa13.14□□□□□ -0.31
SPTLC1-201ENST00000262554 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 TANC1Q9C0D5 1861 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 CCDC78A2IDD5 438 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 CBX6O95503 412 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 GSRP00390 522 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 HMBSP08397 361 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 T-ENOLP0DO92 83 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 FGF3P11487 239 aaPredicted RBP13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 KPNA1P52294 538 aaPredicted RBP13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 POU6F1Q14863 301 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 PCLAFQ15004 111 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 UGP2Q16851 508 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 RAP1GAP2Q684P5 730 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 DENND5AQ6IQ26 1287 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 FBXL22Q6P050 247 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 ZCCHC23Q6ZST2 131 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 NSMCE1Q8WV22 266 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 HMCESQ96FZ2 354 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 VPS39Q96JC1 886 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 ZNF778Q96MU6 729 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 TMEM237Q96Q45 408 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 WWP1Q9H0M0 922 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 CRISPLD1Q9H336 500 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 SP110Q9HB58 689 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 TMEM216Q9P0N5 145 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 BAIAP2L1Q9UHR4 511 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 LNPEPQ9UIQ6 1025 aa13.13□□□□□ -0.31
SPTLC1-201ENST00000262554 A0A096LPK6 155 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 CNTN5O94779 1100 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 VNN2O95498 520 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 IGLV3-27P01718 113 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 SERPINE1P05121 402 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 PAMP19021 973 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 GRK2P25098 689 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 PBX3P40426 434 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 MNAT1P51948 309 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 DUSP4Q13115 394 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 TCTN1Q2MV58 587 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 CTC1Q2NKJ3 1217 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 ALFQ53S48 1182 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 MARC1Q5VT66 337 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 ARMC3Q5W041 872 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 RANBP10Q6VN20 620 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 ZNF354CQ86Y25 554 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 CRIPAKQ8N1N5 446 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 LRRC43Q8N309 656 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 SH3TC2Q8TF17 1288 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 MRGPRX2Q96LB1 330 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 SIKE1Q9BRV8 207 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 MCMBPQ9BTE3 642 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 RHOJQ9H4E5 214 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 ZNF395Q9H8N7 513 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 NT5MQ9NPB1 228 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 COPG2Q9UBF2 871 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 HBS1LQ9Y450 684 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 TCAF1Q9Y4C2 921 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 SLC38A8A6NNN8 435 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 GOLGA8TH3BQL2 631 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms