RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TMED1Q13445 227 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 TMEM135Q86UB9 458 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 ZNF669Q96BR6 464 aaPredicted RBP22.98■■□□□ 1.27
MCF2L-201ENST00000261963 RTP3Q9BQQ7 232 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 CDH9Q9ULB4 789 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 DNAJC16Q9Y2G8 782 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 NCAM2O15394 837 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 MAGEA12P43365 314 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 SLC1A6P48664 564 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 EPHB1P54762 984 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 GALNT2Q10471 571 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 TUBB3Q13509 450 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 INSCQ1MX18 579 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 GRAMD1BQ3KR37 738 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 NADK2Q4G0N4 442 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 GRTP1Q5TC63 336 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 TMC7Q7Z402 723 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 CMC1Q7Z7K0 106 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 C10orf107Q8IVU9 208 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 MARVELD2Q8N4S9 558 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 ZNF513Q8N8E2 541 aaPredicted RBP22.97■■□□□ 1.27
MCF2L-201ENST00000261963 ISL2Q96A47 359 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 HDAC11Q96DB2 347 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 GBA3Q9H227 469 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 LZTS1Q9Y250 596 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 ARL5CA6NH57 179 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 CASQ2O14958 399 aaPredicted RBP22.97■■□□□ 1.27
MCF2L-201ENST00000261963 TYK2P29597 1187 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 ARRB2P32121 409 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 SCNN1GP51170 649 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 DCTN2Q13561 401 aaKnown RBP22.97■■□□□ 1.27
MCF2L-201ENST00000261963 ZNF554Q86TJ5 538 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 ALDH16A1Q8IZ83 802 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 ZFRQ96KR1 1074 aaKnown RBP22.97■■□□□ 1.27
MCF2L-201ENST00000261963 TMEM165Q9HC07 324 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 SNX15Q9NRS6 342 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 ZNF358Q9NW07 568 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 TXNDC16Q9P2K2 825 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 DMTF1Q9Y222 760 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 TRPV2Q9Y5S1 764 aa22.97■■□□□ 1.27
MCF2L-201ENST00000261963 E2F8A0AVK6 867 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 CASTOR2A6NHX0 329 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 SERPINE1P05121 402 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 RAG1P15918 1043 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 CXCR3P49682 368 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 RALGPS1Q5JS13 557 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 INTS6LQ5JSJ4 861 aaKnown RBP22.96■■□□□ 1.27
MCF2L-201ENST00000261963 AGMOQ6ZNB7 445 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 DCLK2Q8N568 766 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.96■■□□□ 1.27
MCF2L-201ENST00000261963 PIWIL2Q8TC59 973 aaKnown RBP22.96■■□□□ 1.27
MCF2L-201ENST00000261963 DPF3Q92784 378 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 GCNAQ96QF7 691 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 AGAP2Q99490 1192 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 SORT1Q99523 831 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 RBBP8Q99708 897 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 TKTL2Q9H0I9 626 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 BFARQ9NZS9 450 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 DENRO43583 198 aaKnown RBP22.96■■□□□ 1.27
MCF2L-201ENST00000261963 ZNF189O75820 626 aaPredicted RBP22.96■■□□□ 1.27
MCF2L-201ENST00000261963 CTSHP09668 335 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 GARSP41250 739 aaKnown RBP22.96■■□□□ 1.27
MCF2L-201ENST00000261963 ARL13BQ3SXY8 428 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 TIGD5Q53EQ6 642 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 CERCAMQ5T4B2 595 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 METTL25Q8N6Q8 603 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 ZSCAN18Q8TBC5 510 aaPredicted RBP22.96■■□□□ 1.27
MCF2L-201ENST00000261963 SMARCD1Q96GM5 515 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 MRPS26Q9BYN8 205 aaKnown RBP22.96■■□□□ 1.27
MCF2L-201ENST00000261963 BRD8Q9H0E9 1235 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 RBM38Q9H0Z9 239 aaKnown RBP22.96■■□□□ 1.27
MCF2L-201ENST00000261963 Q9H521 79 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 CSNK1G1Q9HCP0 422 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 COPG2Q9UBF2 871 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 OR12D3Q9UGF7 316 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 DTNAQ9Y4J8 743 aa22.96■■□□□ 1.27
MCF2L-201ENST00000261963 ARHGAP10A1A4S6 786 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 LRIG2O94898 1065 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 NFKB1P19838 968 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 TLR1Q15399 786 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 C1QTNF12Q5T7M4 302 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 MAVSQ7Z434 540 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 ZFP28Q8NHY6 868 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 DIS3LQ8TF46 1054 aaKnown RBP22.95■■□□□ 1.26
MCF2L-201ENST00000261963 GAB3Q8WWW8 586 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 MYLPFQ96A32 169 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 WDCPQ9H6R7 721 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 RRN3Q9NYV6 651 aa22.95■■□□□ 1.26
MCF2L-201ENST00000261963 PDE5AO76074 875 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 CHRNA1P02708 482 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 MX2P20592 715 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 GALK1P51570 392 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 LIMK2P53671 638 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 FRG1Q14331 258 aaKnown RBP22.94■■□□□ 1.26
MCF2L-201ENST00000261963 PGM2L1Q6PCE3 622 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 STRA8Q7Z7C7 330 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 DNAAF3Q8N9W5 541 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 HIPK4Q8NE63 616 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 MFSD3Q96ES6 412 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 ATXN7L3BQ96GX2 97 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms