RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SLC26A7Q8TE54 656 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 DTD1Q8TEA8 209 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 TGS1Q96RS0 853 aaKnown RBP7.86□□□□□ -1.15
GPNMB-201ENST00000258733 MYD88Q99836 296 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 UBAC1Q9BSL1 405 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 CDK19Q9BWU1 502 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 PRKD2Q9BZL6 878 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 NMUR1Q9HB89 426 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 GSN-AS1Q9NRJ2 163 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 GLTPQ9NZD2 209 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 ATXN7L1Q9ULK2 861 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-201ENST00000258733 HYOU1Q9Y4L1 999 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 DGKBQ9Y6T7 804 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 MROH7-TTC4A0A0A0MT08 1334 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 SYNGAP1Q96PV0 1343 aa7.86□□□□□ -1.15
GPNMB-201ENST00000258733 MED23Q9ULK4 1368 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TCP11X1B4DZS4 312 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 H0YCG3 227 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 RNF103O00237 685 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PPM1BO75688 479 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 POMCP01189 267 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 T-ENOLP0DO92 83 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PTBP1P26599 531 aaKnown RBP eCLIP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 UQCRC1P31930 480 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 MAPK9P45984 424 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 RECQLP46063 649 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 MGAT3Q09327 533 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 KCNC3Q14003 757 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TDRD12Q587J7 1177 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PRR23BQ6ZRT6 265 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 MICALL2Q8IY33 904 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 MPP5Q8N3R9 675 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 MARVELD2Q8N4S9 558 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 KDF1Q8NAX2 398 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 GLB1L3Q8NCI6 653 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF416Q9BWM5 594 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SLC19A3Q9BZV2 496 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PPA2Q9H2U2 334 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ADAM7Q9H2U9 754 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 RIC8BQ9NVN3 520 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ADPRHL2Q9NX46 363 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 EIF3KQ9UBQ5 218 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 KLQ9UEF7 1012 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 FAM198AQ9UFP1 575 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 NOB1Q9ULX3 412 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TRAF6Q9Y4K3 522 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TMEM131LA2VDJ0 1609 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TTC26A0AVF1 554 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PSMD12O00232 456 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 LDLRAD4O15165 306 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 KLHL18O94889 574 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 OAZ2O95190 189 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 LCKP06239 509 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PGRP06401 933 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 XRCC5P13010 732 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 FECHP22830 423 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PRDX6P30041 224 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SERPINB1P30740 379 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ZAP70P43403 619 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TM4SF4P48230 202 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 CASP4P49662 377 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 JAM2P57087 298 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ACTR3P61158 418 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ABATP80404 500 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 THOC5Q13769 683 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SELPLGQ14242 412 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SLC15A2Q16348 729 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 LRRC36Q1X8D7 754 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SFT2D3Q587I9 215 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 FAM47CQ5HY64 1035 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ARHGEF16Q5VV41 709 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 UGT3A1Q6NUS8 523 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 WDR73Q6P4I2 378 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PKN3Q6P5Z2 889 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TMEM65Q6PI78 240 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PAPD4Q6PIY7 484 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PRSS42Q7Z5A4 293 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TXNRD3Q86VQ6 643 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 GPBP1Q86WP2 473 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 RASGRP3Q8IV61 690 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 OR52H1Q8NGJ2 320 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 OR6B3Q8NGW1 331 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 C18orf8Q96DM3 657 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 LRRC37BQ96QE4 947 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 BBS4Q96RK4 519 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 KRT12Q99456 494 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 CADM1Q9BY67 442 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SCUBE2Q9NQ36 999 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PCDHB16Q9NRJ7 776 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TMOD3Q9NYL9 352 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PSME2Q9UL46 239 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ACTL7AQ9Y615 435 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 LOC100653049A0A140TA62 436 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 E2F8A0AVK6 867 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 LEUTXA8MZ59 168 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF197O14709 1029 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SMAD6O43541 496 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 KRT34O76011 436 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms