RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ST3GAL1Q11201 340 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 TAF13Q15543 124 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 CERS5Q8N5B7 392 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 TMEM161BQ8NDZ6 487 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 PROX1Q92786 737 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 CENPTQ96BT3 561 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 EPS8L2Q9H6S3 715 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 LIMD1Q9UGP4 676 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 MRASO14807 208 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 ATP6V1G2O95670 118 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 ERBB2P04626 1255 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 HNRNPH1P31943 449 aaKnown RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 FKBP1BP68106 108 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 TYW3Q6IPR3 259 aaKnown RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 WDR59Q6PJI9 974 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 POMGNT2Q8NAT1 580 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 LNX1Q8TBB1 728 aaPredicted RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 C19orf60Q96EN9 201 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 NSMCE2Q96MF7 247 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 MYLK2Q9H1R3 596 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 RIBC2Q9H4K1 309 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 SIK3Q9Y2K2 1263 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 CHURC1-FNTBB4DL54 471 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 UQCRBP14927 111 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 MAPK8P45983 427 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 MSLNQ13421 630 aaPredicted RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 ARMCX4Q5H9R4 360 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 CPA6Q8N4T0 437 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 SVOPQ8N4V2 548 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 NELL1Q92832 810 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 CXorf40BQ96DE9 158 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 SNRNP25Q9BV90 132 aaKnown RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 ASB8Q9H765 288 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 CHST7Q9NS84 486 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 GPN3Q9UHW5 284 aaPredicted RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 INVSQ9Y283 1065 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 KIF1CO43896 1103 aaKnown RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 SH3BGRLO75368 114 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 ADH1CP00326 375 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 HDCP19113 662 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 S100A3P33764 101 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 KRR1Q13601 381 aaKnown RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 C9orf57Q5W0N0 161 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 IZUMO2Q6UXV1 221 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 APLFQ8IW19 511 aaPredicted RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 HAS1Q92839 578 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 RERGQ96A58 199 aaPredicted RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 NACC2Q96BF6 587 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 NRDE2Q9H7Z3 1164 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.82□□□□□ -1
PTCD3-201ENST00000254630 TMEM216Q9P0N5 145 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 ARHGAP28Q9P2N2 729 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 KLHL3Q9UH77 587 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 ENOPH1Q9UHY7 261 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 MRC1P22897 1456 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 SGTAO43765 313 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 USP12O75317 370 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 WBP4O75554 376 aaKnown RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 FAM153BP0C7A2 387 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ZSCAN5DPP0CG00 497 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 NFKB1P19838 968 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 CDK16Q00536 496 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 FAM153CQ494X1 144 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 SDHAF4Q5VUM1 108 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ZBTB49Q6ZSB9 765 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ZNF621Q6ZSS3 439 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ZCCHC23Q6ZST2 131 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 MOB2Q70IA6 237 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ANKRD52Q8NB46 1076 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 HDAC7Q8WUI4 952 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ZNF75CPQ92670 426 aaPredicted RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 APOL4Q9BPW4 351 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.81□□□□□ -1
PTCD3-201ENST00000254630 DDX20Q9UHI6 824 aaKnown RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 FAM50BQ9Y247 325 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ANXA5P08758 320 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 HOXB8P17481 243 aaPredicted RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 CLCN5P51795 746 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 SQLEQ14534 574 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 DSELQ8IZU8 1212 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 OR8H2Q8N162 312 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 NKAPQ8N5F7 415 aaKnown RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 UBE2E3Q969T4 207 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 HDHD2Q9H0R4 259 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 C2CD2Q9Y426 696 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 CNTNAP1P78357 1384 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 TRIM24O15164 1050 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 CCL16O15467 120 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 UBOX5O94941 541 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 CXCL14O95715 111 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 CLK3P49761 638 aaKnown RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 NDUFV1P49821 464 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 RGS1Q08116 209 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ZNF844Q08AG5 666 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ZNHIT3Q15649 155 aaPredicted RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 ZCWPW2Q504Y3 356 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 C19orf18Q8NEA5 215 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 MARK4Q96L34 752 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 BDH2Q9BUT1 245 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 MIR1-1HGQ9H1L0 117 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms