RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PTGR2Q8N8N7 351 aaPredicted RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 BHLHE22Q8NFJ8 381 aaPredicted RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 ITFG1Q8TB96 612 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 TMEM134Q9H6X4 195 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 CYLDQ9NQC7 956 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 PAPSS1O43252 624 aaPredicted RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 EPORP19235 508 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 TRIM32Q13049 653 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 GSTA3Q16772 222 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 TNS4Q8IZW8 715 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 PCDH12Q9NPG4 1184 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 CLOCKO15516 846 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 KCTD4Q8WVF5 259 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 C18orf25Q96B23 403 aaPredicted RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 LENG9Q96B70 501 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 MRPS23Q9Y3D9 190 aaKnown RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 A0A0A0MRY4 1105 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 CNPP09543 421 aaKnown RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 ITGB5P18084 799 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 COL9A3Q14050 684 aaPredicted RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 AENQ8WTP8 325 aaKnown RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 SPATA13Q96N96 652 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 B3GNT5Q9BYG0 378 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 NRDE2Q9H7Z3 1164 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 VTI1BQ9UEU0 232 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 TRAV19A0A0A6YYK7 116 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 CHURC1-FNTBB4DL54 471 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 OR4Q2P0C623 313 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 PRKAR2AP13861 404 aaKnown RBP18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 BMP6P22004 513 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 IRF8Q02556 426 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 ATP1A4Q13733 1029 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 SERPINA13PQ6UXR4 307 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 OR52K2Q8NGK3 314 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 KLHL5Q96PQ7 755 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 SLC4A5Q9BY07 1137 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 KLHL25Q9H0H3 589 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 PRDM12Q9H4Q4 367 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 COG5Q9UP83 839 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 LDLRP01130 860 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 ELNP15502 786 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 POLR2LP62875 67 aaKnown RBP18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 SLC25A3Q00325 362 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 MAD2L1Q13257 205 aaPredicted RBP18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 CNGA2Q16280 664 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 TTMPQ5BVD1 217 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 LPCAT2Q7L5N7 544 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 DSG4Q86SJ6 1040 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 DNAJC19Q96DA6 116 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 TNFSF13BQ9Y275 285 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 ANKRD6Q9Y2G4 727 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 C1orf232A0A0U1RR37 186 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 LIASO43766 372 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 MAFO75444 373 aaPredicted RBP18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 CYP1A1P04798 512 aaPredicted RBP18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 IFNA16P05015 189 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 ZNF143P52747 638 aaPredicted RBP18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 CACNA2D1P54289 1103 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 C1DQ13901 141 aaKnown RBP18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 SNX30Q5VWJ9 437 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 DGCR6LQ9BY27 220 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 OSBPL6Q9BZF3 934 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 DEPDC5O75140 1603 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 VAV1P15498 845 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 GTF2BQ00403 316 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 FMO1Q01740 532 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 TRMT5Q32P41 509 aaKnown RBP18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 DNAJB14Q8TBM8 379 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 ATXN2Q99700 1313 aaKnown RBP18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 FAM58BPP0C7Q3 252 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 GPR1P46091 355 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 DGCR6Q14129 220 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 CYP4Z2PQ8N1L4 340 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 MIEF2Q96C03 454 aa18.91■□□□□ 0.62
SMARCC1-201ENST00000254480 ATP6AP2A0A1C7CYW4 349 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 MSI1O43347 362 aaKnown RBP18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 ATP6AP2O75787 350 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 TAS2R40P59535 323 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 HDDC2Q7Z4H3 204 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 ZC3H7AQ8IWR0 971 aaKnown RBP18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 SLC12A4Q9UP95 1085 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 UBIAD1Q9Y5Z9 338 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 FKBP6O75344 327 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 CDK16Q00536 496 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 TAF5Q15542 800 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 PCID2Q5JVF3 399 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 FAM163AQ96GL9 167 aaPredicted RBP18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 BDH2Q9BUT1 245 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 ASAH2Q9NR71 780 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 VPS51Q9UID3 782 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 PCDHA11Q9Y5I1 949 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 CASZ1Q86V15 1759 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 KLRC4O43908 158 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 AMD1P17707 334 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 RPL14P50914 215 aaKnown RBP18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 INAQ16352 499 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 NLNQ9BYT8 704 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 ADPRHL2Q9NX46 363 aa18.9■□□□□ 0.62
SMARCC1-201ENST00000254480 A0A087X1B8 175 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms