RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 LMAN2Q12907 356 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 RUNX3Q13761 415 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 PRPSAP1Q14558 356 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 LBRQ14739 615 aaKnown RBP13.18□□□□□ -0.3
LSM8-201ENST00000249299 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
LSM8-201ENST00000249299 FSCBQ5H9T9 825 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 ARMC3Q5W041 872 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 HIBCHQ6NVY1 386 aaPredicted RBP13.18□□□□□ -0.3
LSM8-201ENST00000249299 EMBQ6PCB8 327 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 PARM1Q6UWI2 310 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 AHI1Q8N157 1196 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 KDM1BQ8NB78 822 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 GLIS1Q8NBF1 620 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 MCUQ8NE86 351 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 TTC16Q8NEE8 873 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 OR7D4Q8NG98 312 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 OR52K2Q8NGK3 314 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 CCDC110Q8TBZ0 833 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 ISG20Q96AZ6 181 aaKnown RBP13.18□□□□□ -0.3
LSM8-201ENST00000249299 FCRL5Q96RD9 977 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 PNKPQ96T60 521 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 SPON2Q9BUD6 331 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 RAB6BQ9NRW1 208 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 VPS45Q9NRW7 570 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 ABCB8Q9NUT2 735 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 KLHL8Q9P2G9 620 aaPredicted RBP13.18□□□□□ -0.3
LSM8-201ENST00000249299 UBA2Q9UBT2 640 aaPredicted RBP13.18□□□□□ -0.3
LSM8-201ENST00000249299 ANAPC5Q9UJX4 755 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 SNX24Q9Y343 169 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 DOCK4Q8N1I0 1966 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 J3KR12 359 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 SCAMP3O14828 347 aaKnown RBP13.17□□□□□ -0.3
LSM8-201ENST00000249299 ANXA9O76027 345 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 ZSCAN5DPP0CG00 497 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 TPSB2P20231 275 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 MZF1P28698 734 aaPredicted RBP13.17□□□□□ -0.3
LSM8-201ENST00000249299 HLA-FP30511 346 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 MMP13P45452 471 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 VSNL1P62760 191 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
LSM8-201ENST00000249299 SKIV2LQ15477 1246 aaKnown RBP13.17□□□□□ -0.3
LSM8-201ENST00000249299 TRIP13Q15645 432 aaPredicted RBP13.17□□□□□ -0.3
LSM8-201ENST00000249299 TPSAB1Q15661 275 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 ITPRIPL2Q3MIP1 535 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 RNASEH2BQ5TBB1 312 aaKnown RBP13.17□□□□□ -0.3
LSM8-201ENST00000249299 IZUMO3Q5VZ72 239 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 ARHGAP36Q6ZRI8 547 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 NUDT18Q6ZVK8 323 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 Q7L0L9 218 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 ZNF354CQ86Y25 554 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 RELL1Q8IUW5 271 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 CNTD1Q8N815 330 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 FGF14Q92915 247 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 TTC17Q96AE7 1141 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 ASIC4Q96FT7 647 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 SLC25A51Q9H1U9 297 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 C10orf88Q9H8K7 445 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 GLOD4Q9HC38 313 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 HPS4Q9NQG7 708 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 ZDHHC18Q9NUE0 388 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 RBM22Q9NW64 420 aaKnown RBP eCLIP13.17□□□□□ -0.3
LSM8-201ENST00000249299 DEC1Q9P2X7 70 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 GGA2Q9UJY4 613 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 HS3ST2Q9Y278 367 aa13.17□□□□□ -0.3
LSM8-201ENST00000249299 CBX4O00257 560 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 ARNTLO00327 626 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 TP73O15350 636 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 EIF3HO15372 352 aaKnown RBP eCLIP13.16□□□□□ -0.3
LSM8-201ENST00000249299 ZBTB24O43167 697 aaPredicted RBP13.16□□□□□ -0.3
LSM8-201ENST00000249299 PPFIA2O75334 1257 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 SUN1O94901 812 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 CISD3P0C7P0 127 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 MLNP12872 115 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 GLULP15104 373 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
LSM8-201ENST00000249299 MAPK8P45983 427 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 CSNK1DP48730 415 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 CARSP49589 748 aaKnown RBP13.16□□□□□ -0.3
LSM8-201ENST00000249299 DGKGP49619 791 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 MRPS25P82663 173 aaKnown RBP13.16□□□□□ -0.3
LSM8-201ENST00000249299 ZBTB17Q13105 803 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 HLTFQ14527 1009 aaKnown RBP eCLIP13.16□□□□□ -0.3
LSM8-201ENST00000249299 KCNJ11Q14654 390 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 NAA30Q147X3 362 aaPredicted RBP13.16□□□□□ -0.3
LSM8-201ENST00000249299 PITRM1Q5JRX3 1037 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 SPDYCQ5MJ68 293 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 ZCCHC9Q8N567 271 aaKnown RBP13.16□□□□□ -0.3
LSM8-201ENST00000249299 NAT8LQ8N9F0 302 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 WFDC5Q8TCV5 224 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 IFT81Q8WYA0 676 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 CPT1BQ92523 772 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 DNASE1L2Q92874 299 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 MSANTD3Q96H12 275 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 FMO2Q99518 471 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 MGME1Q9BQP7 344 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 TRIM31Q9BZY9 425 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 CEP44Q9C0F1 390 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 POLR1EQ9GZS1 481 aaKnown RBP13.16□□□□□ -0.3
LSM8-201ENST00000249299 DPH5Q9H2P9 285 aa13.16□□□□□ -0.3
LSM8-201ENST00000249299 EBF3Q9H4W6 596 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms