RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CCDC170Q8IYT3 715 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 HDDC3Q8N4P3 179 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 PIP4K2CQ8TBX8 421 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 NUSAP1Q9BXS6 441 aaKnown RBP24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 NEUROG2Q9H2A3 272 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 TMEM74BQ9NUR3 256 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 TPX2Q9ULW0 747 aaKnown RBP24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 LRRC72A6NJI9 287 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 CD160O95971 181 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 MAN1A1P33908 653 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 SERINC3Q13530 473 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 SMTNL2Q2TAL5 461 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 INO80DQ53TQ3 878 aaPredicted RBP24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 TRIM61Q5EBN2 209 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 CARD16Q5EG05 197 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 SLC23A3Q6PIS1 610 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 AADATQ8N5Z0 425 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 LZTR1Q8N653 840 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 HSPH1Q92598 858 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 PANX2Q96RD6 677 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 SMOC1Q9H4F8 434 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 LRRC19Q9H756 370 aa24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 CWC15Q9P013 229 aaKnown RBP24.82■■□□□ 1.56
SDF2L1-201ENST00000248958 ARHGAP42A6NI28 874 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 BUB1O43683 1085 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 CYLC1P35663 651 aaPredicted RBP24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 ARHGAP25P42331 645 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 SSR1P43307 286 aaKnown RBP24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 LIMK1P53667 647 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 OR2T34Q8NGX1 318 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 SLC35G2Q8TBE7 412 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 FAM131CQ96AQ9 280 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 HMCESQ96FZ2 354 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 KDM4CQ9H3R0 1056 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 LUC7LQ9NQ29 371 aaKnown RBP24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 RCOR3Q9P2K3 495 aaPredicted RBP24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 IL36AQ9UHA7 158 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 SARDHQ9UL12 918 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 SLC6A14Q9UN76 642 aa24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 FCF1Q9Y324 198 aaKnown RBP24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 ATXN2Q99700 1313 aaKnown RBP24.81■■□□□ 1.56
SDF2L1-201ENST00000248958 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 ZNF821O75541 412 aaPredicted RBP24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 MTA2O94776 668 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 SERPINF2P08697 491 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 TCF4P15884 667 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 DRD3P35462 400 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 SNRPD1P62314 119 aaKnown RBP24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 DPYSQ14117 519 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 TCEAL1Q15170 157 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 POLNQ7Z5Q5 900 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 RFFLQ8WZ73 363 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 PPP1R16AQ96I34 528 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 LRIG1Q96JA1 1093 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 HEPHQ9BQS7 1158 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 TNKS2Q9H2K2 1166 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 C6orf106Q9H6K1 298 aaPredicted RBP24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 OSGEPQ9NPF4 335 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 DYRK4Q9NR20 520 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 SERGEFQ9UGK8 458 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 CDV3Q9UKY7 258 aaKnown RBP24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 ZNF292O60281 2723 aa24.8■■□□□ 1.56
SDF2L1-201ENST00000248958 PI4KAP42356 2102 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 NUMA1Q14980 2115 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 LCA5LO95447 670 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 GSRP00390 522 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 KRT7P08729 469 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 ID4P47928 161 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 DNA2P51530 1060 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 KRT81Q14533 505 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 AFMIDQ63HM1 303 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 KIAA0895LQ68EN5 471 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 DPY19L3Q6ZPD9 716 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 SLC39A8Q9C0K1 460 aa24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.79■■□□□ 1.56
SDF2L1-201ENST00000248958 A0A1B0GTW7 788 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 PATE3B3GLJ2 98 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 CTSLP07711 333 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 CDC25BP30305 580 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 MAGEA1P43355 309 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 ADPRHP54922 357 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 IRX4P78413 519 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 PUM1Q14671 1186 aaKnown RBP eCLIP24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 SPA17Q15506 151 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 RSPO4Q2I0M5 234 aaPredicted RBP24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 TXNRD3NBQ6F5E7 133 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 TCEAL6Q6IPX3 200 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 TMTC1Q8IUR5 882 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 CHST14Q8NCH0 376 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 OR2AP1Q8NGE2 309 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 OR14C36Q8NHC7 312 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 FAM71BQ8TC56 605 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 TCEAL3Q969E4 200 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 RTKNQ9BST9 563 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 EDEM2Q9BV94 578 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 KLC2Q9H0B6 622 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 PCDH18Q9HCL0 1135 aa24.78■■□□□ 1.56
SDF2L1-201ENST00000248958 UBA2Q9UBT2 640 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms