RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 KDELR3O43731 214 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 PRNPP04156 253 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 H2AFZP0C0S5 128 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 TMEM253P0C7T8 217 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 DRD3P35462 400 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 HCAR3P49019 387 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 NDST2P52849 883 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 ADPRHP54922 357 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 SLC25A11Q02978 314 aaKnown RBP13.03□□□□□ -0.32
VPREB3-201ENST00000248948 CA9Q16790 459 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 H2AFVQ71UI9 128 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 HDDC3Q8N4P3 179 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 DEFB119Q8N690 84 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 TMIEQ8NEW7 156 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 OR2T34Q8NGX1 318 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 PIP4K2CQ8TBX8 421 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 GANCQ8TET4 914 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 PPP1R16AQ96I34 528 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 KCTD15Q96SI1 283 aaPredicted RBP13.03□□□□□ -0.32
VPREB3-201ENST00000248948 KDM4CQ9H3R0 1056 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 C6orf106Q9H6K1 298 aaPredicted RBP13.03□□□□□ -0.32
VPREB3-201ENST00000248948 ZWILCHQ9H900 591 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 OSGEPQ9NPF4 335 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 GPATCH2LQ9NWQ4 482 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 SLC6A14Q9UN76 642 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 SHROOM3Q8TF72 1996 aa13.03□□□□□ -0.32
VPREB3-201ENST00000248948 H3BRJ5 948 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 MYO1FO00160 1098 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 GDF9O60383 454 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 ZNF821O75541 412 aaPredicted RBP13.02□□□□□ -0.33
VPREB3-201ENST00000248948 GSRP00390 522 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 CFIP05156 583 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 IL1R2P27930 398 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 CHRNA3P32297 505 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 MAN1A1P33908 653 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 ADKP55263 362 aaKnown RBP13.02□□□□□ -0.33
VPREB3-201ENST00000248948 CCDC15Q0P6D6 951 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 BOLA3Q53S33 107 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 PPP6R3Q5H9R7 873 aaPredicted RBP13.02□□□□□ -0.33
VPREB3-201ENST00000248948 STPG1Q5TH74 334 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 AGBL4Q5VU57 503 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 KIAA0895LQ68EN5 471 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 ERMP1Q7Z2K6 904 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 ZCCHC9Q8N567 271 aaKnown RBP13.02□□□□□ -0.33
VPREB3-201ENST00000248948 BIRC7Q96CA5 298 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 LRIG1Q96JA1 1093 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 ZDHHC5Q9C0B5 715 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 RBSNQ9H1K0 784 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 LRRC19Q9H756 370 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 NHEJ1Q9H9Q4 299 aaPredicted RBP13.02□□□□□ -0.33
VPREB3-201ENST00000248948 TMEM9BQ9NQ34 198 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 RXFP3Q9NSD7 469 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.02□□□□□ -0.33
VPREB3-201ENST00000248948 CTTNBP2NLQ9P2B4 639 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 RCOR3Q9P2K3 495 aaPredicted RBP13.02□□□□□ -0.33
VPREB3-201ENST00000248948 IL36AQ9UHA7 158 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 SARDHQ9UL12 918 aa13.02□□□□□ -0.33
VPREB3-201ENST00000248948 RASA4BC9J798 803 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 RASA4O43374 803 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 PLRG1O43660 514 aaKnown RBP13.01□□□□□ -0.33
VPREB3-201ENST00000248948 BNIP3LO60238 219 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 PROSCO94903 275 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 CD160O95971 181 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 IGHV4-34P06331 123 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 CTSLP07711 333 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 SYPP08247 313 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 ENGP17813 658 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 CD27P26842 260 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 NUDT1P36639 197 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 ARL4AP40617 200 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 CCR5P51681 352 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 ZNF75DP51815 510 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 CCNHP51946 323 aaPredicted RBP13.01□□□□□ -0.33
VPREB3-201ENST00000248948 IRX4P78413 519 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 SERINC3Q13530 473 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 DPYSQ14117 519 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 SMTNL2Q2TAL5 461 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 INO80DQ53TQ3 878 aaPredicted RBP13.01□□□□□ -0.33
VPREB3-201ENST00000248948 CARD16Q5EG05 197 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 DAB2IPQ5VWQ8 1189 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 NCEH1Q6PIU2 408 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 DPY19L3Q6ZPD9 716 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 ZNF354CQ86Y25 554 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 RHOT2Q8IXI1 618 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 TC2NQ8N9U0 490 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 OR2AP1Q8NGE2 309 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 GRIN3AQ8TCU5 1115 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 SNX19Q92543 992 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 HMCESQ96FZ2 354 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 GDAP1L1Q96MZ0 367 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 CHP1Q99653 195 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 PACSIN1Q9BY11 444 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 NEUROG2Q9H2A3 272 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 TNKS2Q9H2K2 1166 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 PDFQ9HBH1 243 aa13.01□□□□□ -0.33
VPREB3-201ENST00000248948 PREBQ9HCU5 417 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms