RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 TMCO4Q5TGY1 634 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 TEX26Q8N6G2 289 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 TSEN2Q8NCE0 465 aaKnown RBP20.5■□□□□ 0.87
SNRPA-201ENST00000243563 CCDC110Q8TBZ0 833 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 FATE1Q969F0 183 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 ERLEC1Q96DZ1 483 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 EXOC2Q96KP1 924 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 UHRF1Q96T88 793 aaPredicted RBP20.5■□□□□ 0.87
SNRPA-201ENST00000243563 FOXQ1Q9C009 403 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 HOMER3Q9NSC5 361 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 CKAP5Q14008 2032 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 SGK1O00141 431 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 HLA-EP13747 358 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 TARSP26639 723 aaKnown RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 FNTAP49354 379 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 MAXP61244 160 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 ZXDAP98168 799 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 CCINQ13939 588 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 EIF4HQ15056 248 aaKnown RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 TRIP13Q15645 432 aaPredicted RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 TIGD7Q6NT04 549 aaPredicted RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 RETSATQ6NUM9 610 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 UBALD2Q8IYN6 164 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 TAB3Q8N5C8 712 aaPredicted RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 ATP11CQ8NB49 1132 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 VOPP1Q96AW1 172 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 RTP4Q96DX8 246 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 AGAP3Q96P47 875 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 GORASP1Q9BQQ3 440 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 TNKS2Q9H2K2 1166 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 NT5MQ9NPB1 228 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 RBM22Q9NW64 420 aaKnown RBP eCLIP20.49■□□□□ 0.872e-7■■■■□ 22.2
SNRPA-201ENST00000243563 SLC25A13Q9UJS0 675 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 ZBTB24O43167 697 aaPredicted RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 PRKCHP24723 683 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 TIE1P35590 1138 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 IL12RB1P42701 662 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 WASP42768 502 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 TNFRSF4P43489 277 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 MMP13P45452 471 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 SULT2A1Q06520 285 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 FZD5Q13467 585 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 HNRNPDQ14103 355 aaKnown RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 ATXN7L2Q5T6C5 722 aaPredicted RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 PKN3Q6P5Z2 889 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 CCDC105Q8IYK2 499 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 ATL2Q8NHH9 583 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 FRS2Q8WU20 508 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 ZNF599Q96NL3 588 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 TRIM51Q9BSJ1 452 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 POLR3BQ9NW08 1133 aaPredicted RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 CACNA2D2Q9NY47 1150 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 THAP10Q9P2Z0 257 aaPredicted RBP20.49■□□□□ 0.87
SNRPA-201ENST00000243563 PCYOX1Q9UHG3 505 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 STARD13Q9Y3M8 1113 aa20.49■□□□□ 0.87
SNRPA-201ENST00000243563 CTAGE15A4D2H0 777 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 ZSCAN5CA6NGD5 496 aaPredicted RBP20.48■□□□□ 0.87
SNRPA-201ENST00000243563 TTI1O43156 1089 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 RAD51CO43502 376 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 IFNB1P01574 187 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 ASLP04424 464 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 CTAGE8P0CG41 777 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 DRD1P21728 446 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 STARD6P59095 220 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 PRKCQQ04759 706 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 GRSF1Q12849 480 aaKnown RBP eCLIP20.48■□□□□ 0.87
SNRPA-201ENST00000243563 DLG2Q15700 870 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 C2orf27AQ580R0 203 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 MARC1Q5VT66 337 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 C22orf39Q6P5X5 142 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 CTAGE6Q86UF2 777 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 SUGP1Q8IWZ8 645 aaKnown RBP20.48■□□□□ 0.87
SNRPA-201ENST00000243563 CTAGE4Q8IX94 777 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 MSANTD3Q96H12 275 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 TM6SF2Q9BZW4 377 aa20.48■□□□□ 0.87
SNRPA-201ENST00000243563 ATP9BO43861 1147 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 ATP5BP06576 529 aaKnown RBP20.47■□□□□ 0.87
SNRPA-201ENST00000243563 SRPRAP08240 638 aaKnown RBP20.47■□□□□ 0.87
SNRPA-201ENST00000243563 NIPAL4Q0D2K0 466 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 FNDC3BQ53EP0 1204 aaKnown RBP20.47■□□□□ 0.87
SNRPA-201ENST00000243563 TEX44Q53QW1 395 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 INO80DQ53TQ3 878 aaPredicted RBP20.47■□□□□ 0.87
SNRPA-201ENST00000243563 ANKRD20A2Q5SQ80 823 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 ANKRD20A1Q5TYW2 823 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 ANKRD20A3Q5VUR7 823 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 ZNF852Q6ZMS4 543 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 Q6ZS52 159 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 Q6ZVU0 165 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 CEP112Q8N8E3 955 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 TEKT5Q96M29 485 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 TMEM245Q9H330 911 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 LTB4R2Q9NPC1 389 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 ATP8A1Q9Y2Q0 1164 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 TTLL3Q9Y4R7 772 aa20.47■□□□□ 0.87
SNRPA-201ENST00000243563 C5orf60A6NFR6 353 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 MAN2B1O00754 1011 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 INSIG1O15503 277 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 TIMM44O43615 452 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 RNF40O75150 1001 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms