RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 MIIPQ5JXC2 388 aa14.15□□□□□ -0.14
DDX39A-201ENST00000242776 PTAR1Q7Z6K3 402 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-201ENST00000242776 PPM1KQ8N3J5 372 aa14.15□□□□□ -0.14
DDX39A-201ENST00000242776 OR52K2Q8NGK3 314 aa14.15□□□□□ -0.14
DDX39A-201ENST00000242776 RNF34Q969K3 372 aa14.15□□□□□ -0.14
DDX39A-201ENST00000242776 SYNDIG1Q9H7V2 258 aa14.15□□□□□ -0.14
DDX39A-201ENST00000242776 GRPEL1Q9HAV7 217 aa14.15□□□□□ -0.14
DDX39A-201ENST00000242776 KIAA1257Q9ULG3 409 aa14.15□□□□□ -0.14
DDX39A-201ENST00000242776 PPM1HQ9ULR3 514 aa14.15□□□□□ -0.14
DDX39A-201ENST00000242776 RP1P56715 2156 aa14.15□□□□□ -0.14
DDX39A-201ENST00000242776 COL27A1Q8IZC6 1860 aaPredicted RBP14.14□□□□□ -0.15
DDX39A-201ENST00000242776 LY6G6EA0A0G2JKS1 128 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 A0A1B0GTH6 734 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 GTPBP10A4D1E9 387 aaKnown RBP14.14□□□□□ -0.15
DDX39A-201ENST00000242776 RNF103O00237 685 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 TBXAS1P24557 533 aaPredicted RBP14.14□□□□□ -0.15
DDX39A-201ENST00000242776 AKT2P31751 481 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 SULT2A1Q06520 285 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 NFATC3Q12968 1075 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
DDX39A-201ENST00000242776 PIP5KL1Q5T9C9 394 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 CXorf57Q6NSI4 855 aaKnown RBP14.14□□□□□ -0.15
DDX39A-201ENST00000242776 GUSBP11Q6P575 273 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 GBP6Q6ZN66 633 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 SLC22A18ASQ8N1D0 253 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 ATP6V0D2Q8N8Y2 350 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 TMEM145Q8NBT3 493 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 MED8Q96G25 268 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 WBP1Q96G27 269 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 TRIM5Q9C035 493 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 PREBQ9HCU5 417 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 NLGN3Q9NZ94 848 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 IFNKQ9P0W0 207 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 U3KQA8 63 aa14.14□□□□□ -0.15
DDX39A-201ENST00000242776 K7ESM1 405 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 DXOO77932 396 aaKnown RBP14.13□□□□□ -0.15
DDX39A-201ENST00000242776 TRUB2O95900 331 aaKnown RBP14.13□□□□□ -0.15
DDX39A-201ENST00000242776 CTSLP07711 333 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 PAEPP09466 180 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 NUDT1P36639 197 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 NFKB2Q00653 900 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 UBXN1Q04323 297 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 ISXQ2M1V0 245 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 ZNF284Q2VY69 593 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 C6orf132Q5T0Z8 1188 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 SEL1L3Q68CR1 1132 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 DENND1BQ6P3S1 775 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 CCDC81Q6ZN84 652 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 GCNT7Q6ZNI0 430 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 Q6ZSR6 202 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 RRAGAQ7L523 313 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 APTXQ7Z2E3 356 aaKnown RBP14.13□□□□□ -0.15
DDX39A-201ENST00000242776 EFL1Q7Z2Z2 1120 aaKnown RBP14.13□□□□□ -0.15
DDX39A-201ENST00000242776 GRIN3AQ8TCU5 1115 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 FAM131CQ96AQ9 280 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 BTN2A3PQ96KV6 586 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 HSFY1Q96LI6 401 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 RPRD1AQ96P16 312 aaPredicted RBP14.13□□□□□ -0.15
DDX39A-201ENST00000242776 NT5C1BQ96P26 610 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 DPH1Q9BZG8 443 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 FAM204AQ9H8W3 233 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 RTN4Q9NQC3 1192 aaKnown RBP14.13□□□□□ -0.15
DDX39A-201ENST00000242776 VPS28Q9UK41 221 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 COQ4Q9Y3A0 265 aa14.13□□□□□ -0.15
DDX39A-201ENST00000242776 AGRPO00253 132 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 ENDOD1O94919 500 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 HNRNPA2B1P22626 353 aaKnown RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 DUSP3P51452 185 aaPredicted RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 SLC12A1Q13621 1099 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 EXOC3L4Q17RC7 722 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 DEFB133Q30KQ1 61 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 HORMAD1Q86X24 394 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 VANGL2Q9ULK5 521 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 ZFR2Q9UPR6 939 aaKnown RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 HEMK1Q9Y5R4 338 aaPredicted RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 TCAF2A6NFQ2 919 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 NEMP2A6NFY4 417 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 KCNU1A8MYU2 1149 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 K7ENP7 123 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 K7ERQ8 282 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 MCF2LO15068 1137 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 SCAMP1O15126 338 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 ATP9BO43861 1147 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 SNAP91O60641 907 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 MT-CO1P00395 513 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 NNTQ13423 1086 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 TAF5Q15542 800 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 RABGAP1LQ5R372 815 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 FBXL22Q6P050 247 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 INO80CQ6PI98 192 aaPredicted RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 ARHGEF19Q8IW93 802 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 SH2D3CQ8N5H7 860 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 ATP11CQ8NB49 1132 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 CHST14Q8NCH0 376 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 LMX1AQ8TE12 382 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 ALG14Q96F25 216 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 NAP1L5Q96NT1 182 aaPredicted RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 PRMT1Q99873 361 aaKnown RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 FEM1AQ9BSK4 669 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 FAM117AQ9C073 453 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms