RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 LBX2Q6XYB7 198 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 RNF111Q6ZNA4 994 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 RASSF3Q86WH2 238 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 ADGRF2Q8IZF7 708 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 NDUFAF2Q8N183 169 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 ADCY4Q8NFM4 1077 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 NSUN6Q8TEA1 469 aaKnown RBP6.41□□□□□ -1.38
SGIP1-201ENST00000237247 QKIQ96PU8 341 aaKnown RBP eCLIP6.41□□□□□ -1.38
SGIP1-201ENST00000237247 KLF6Q99612 283 aaPredicted RBP6.41□□□□□ -1.38
SGIP1-201ENST00000237247 IER2Q9BTL4 223 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 MROQ9BYG7 248 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 C2orf40Q9H1Z8 148 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 MRM3Q9HC36 420 aaKnown RBP6.41□□□□□ -1.38
SGIP1-201ENST00000237247 ABI2Q9NYB9 513 aaPredicted RBP6.41□□□□□ -1.38
SGIP1-201ENST00000237247 MORF4L1Q9UBU8 362 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 EMCNQ9ULC0 261 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 LZTS1Q9Y250 596 aa6.41□□□□□ -1.38
SGIP1-201ENST00000237247 KRBA1A5PL33 1030 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 ZSCAN5BA6NJL1 495 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 C2CD4BA6NLJ0 364 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 PLIN3O60664 434 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 SIN3BO75182 1162 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 RGS20O76081 388 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 MAP3K6O95382 1288 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 ALOX5P09917 674 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 ZNF23P17027 643 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 ITGAXP20702 1163 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 FDFT1P37268 417 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 PSMD8P48556 350 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 ZNF135P52742 658 aaPredicted RBP6.4□□□□□ -1.38
SGIP1-201ENST00000237247 NFE2L1Q14494 772 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 TJAP1Q5JTD0 557 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 OR10Z1Q8NGY1 313 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 CHAC2Q8WUX2 184 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 TRUB1Q8WWH5 349 aaKnown RBP6.4□□□□□ -1.38
SGIP1-201ENST00000237247 TP53INP1Q96A56 240 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 SORT1Q99523 831 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 MRPL9Q9BYD2 267 aaKnown RBP6.4□□□□□ -1.38
SGIP1-201ENST00000237247 C12orf65Q9H3J6 166 aaKnown RBP6.4□□□□□ -1.38
SGIP1-201ENST00000237247 CYTH4Q9UIA0 394 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 MOSPD1Q9UJG1 213 aa6.4□□□□□ -1.38
SGIP1-201ENST00000237247 OR5K3A6NET4 321 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 CXorf49A8MYA2 514 aaPredicted RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 APOL1O14791 398 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 POLR1CO15160 346 aaPredicted RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 MSCO60682 206 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 PROCP04070 461 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 YBX3P16989 372 aaKnown RBP eCLIP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 POLD2P49005 469 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 INCA1Q0VD86 236 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 GNA13Q14344 377 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 PCLAFQ15004 111 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 LSM12Q3MHD2 195 aaKnown RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 LMBRD2Q68DH5 695 aaPredicted RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 AADATQ8N5Z0 425 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 PLD5Q8N7P1 536 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 PPM1NQ8N819 430 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 GALNT11Q8NCW6 608 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 GDPD5Q8WTR4 605 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 HERVK_113Q902F9 699 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 TOP1MTQ969P6 601 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 DUS3LQ96G46 650 aaKnown RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 PEBP4Q96S96 227 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 YME1L1Q96TA2 773 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 SLC2A11Q9BYW1 496 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 ZNF385DQ9H6B1 395 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 ARMC7Q9H6L4 198 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 PTPRHQ9HD43 1115 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 RCOR3Q9P2K3 495 aaPredicted RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 POMPQ9Y244 141 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 PCDHB12Q9Y5F1 795 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 CLRN2A0PK11 232 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 SHOXO15266 292 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 MAFO75444 373 aaPredicted RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 SEC24DO94855 1032 aaPredicted RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 PRKCGP05129 697 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 GSTM1P09488 218 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 C6orf222P0C671 652 aaPredicted RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 IDH3AP50213 366 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 CSRP3P50461 194 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 HIRAP54198 1017 aaPredicted RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 C21orf59P57076 290 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 CAPSQ13938 189 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 ZNF699Q32M78 642 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 FASTKD1Q53R41 847 aaKnown RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 ZBTB41Q5SVQ8 909 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 SHEQ5VZ18 495 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 SWSAP1Q6NVH7 229 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 MAVSQ7Z434 540 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 ZDHHC17Q8IUH5 632 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 PQLC3Q8N755 202 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 TRIB2Q92519 343 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 MARVELD3Q96A59 401 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 FAM167AQ96KS9 214 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 ACO2Q99798 780 aaKnown RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 SPOCK3Q9BQ16 436 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 HOXD1Q9GZZ0 328 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 RAVER2Q9HCJ3 691 aaKnown RBP6.4□□□□□ -1.39
SGIP1-201ENST00000237247 VPS45Q9NRW7 570 aa6.4□□□□□ -1.39
SGIP1-201ENST00000237247 GPRC5DQ9NZD1 345 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms