RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 KDELR3O43731 214 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 ATP9BO43861 1147 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 RHOBTB1O94844 696 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 DNTTP04053 509 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 HLA-EP13747 358 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 GOT1P17174 413 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 IL1R2P27930 398 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 OXTRP30559 389 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 CTSOP43234 321 aaPredicted RBP11.52□□□□□ -0.57
SF3B6-201ENST00000233468 CCDC15Q0P6D6 951 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 ELAVL3Q14576 367 aaKnown RBP11.52□□□□□ -0.57
SF3B6-201ENST00000233468 DLG2Q15700 870 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 ELF2Q15723 593 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 CA9Q16790 459 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 AASDHQ4L235 1098 aaPredicted RBP11.52□□□□□ -0.57
SF3B6-201ENST00000233468 FAM46CQ5VWP2 391 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 ZNF776Q68DI1 518 aaPredicted RBP11.52□□□□□ -0.57
SF3B6-201ENST00000233468 TMCO3Q6UWJ1 677 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 KIAA1324Q6UXG2 1013 aaKnown RBP11.52□□□□□ -0.57
SF3B6-201ENST00000233468 RAD9BQ6WBX8 426 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 SLC36A4Q6YBV0 504 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 TMPRSS6Q8IU80 811 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 RHOT1Q8IXI2 618 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 SH2D3CQ8N5H7 860 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 OR7D4Q8NG98 312 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 RPL10LQ96L21 214 aaKnown RBP11.52□□□□□ -0.57
SF3B6-201ENST00000233468 MRGPRX1Q96LB2 322 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 ZNF670Q9BS34 389 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 MAK16Q9BXY0 300 aaKnown RBP11.52□□□□□ -0.57
SF3B6-201ENST00000233468 ACE2Q9BYF1 805 aaPredicted RBP11.52□□□□□ -0.57
SF3B6-201ENST00000233468 PRSS16Q9NQE7 514 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 CWC15Q9P013 229 aaKnown RBP11.52□□□□□ -0.57
SF3B6-201ENST00000233468 VPS51Q9UID3 782 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 NCKAP1Q9Y2A7 1128 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 CEP295Q9C0D2 2601 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 MYO18AQ92614 2054 aaKnown RBP11.51□□□□□ -0.57
SF3B6-201ENST00000233468 TTC34A8MYJ7 566 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 RASA4BC9J798 803 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 TM4SF5O14894 197 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 ALOX15BO15296 676 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 PJA2O43164 708 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 RASA4O43374 803 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 PSTPIP1O43586 416 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 ZNF806P0C7X5 589 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 ERCC2P18074 760 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 GABRG2P18507 467 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 NDUFV2P19404 249 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 GJC1P36383 396 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 SERPINH1P50454 418 aaKnown RBP11.51□□□□□ -0.57
SF3B6-201ENST00000233468 INO80DQ53TQ3 878 aaPredicted RBP11.51□□□□□ -0.57
SF3B6-201ENST00000233468 SPDYCQ5MJ68 293 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 N4BP2L1Q5TBK1 243 aaPredicted RBP11.51□□□□□ -0.57
SF3B6-201ENST00000233468 TMCO4Q5TGY1 634 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 TCEAL6Q6IPX3 200 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 C11orf63Q6NUN7 778 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 KIAA1211LQ6NV74 962 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 CYP4V2Q6ZWL3 525 aaPredicted RBP11.51□□□□□ -0.57
SF3B6-201ENST00000233468 DAAM2Q86T65 1068 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 SYCE1Q8N0S2 351 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 PCDH20Q8N6Y1 951 aaKnown RBP11.51□□□□□ -0.57
SF3B6-201ENST00000233468 OR52K2Q8NGK3 314 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 NSMCE1Q8WV22 266 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 OR8D1Q8WZ84 308 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 TCEAL3Q969E4 200 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 ISG20Q96AZ6 181 aaKnown RBP11.51□□□□□ -0.57
SF3B6-201ENST00000233468 MYO19Q96H55 970 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 CSPG4P5Q96PW8 444 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 PSMB7Q99436 277 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 CALN1Q9BXU9 219 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 MAGEB5Q9BZ81 275 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 TPSD1Q9BZJ3 242 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 PCDH18Q9HCL0 1135 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 SLCO3A1Q9UIG8 710 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 NEU3Q9UQ49 428 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 INVSQ9Y283 1065 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 AKAP13Q12802 2813 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 GON4LQ3T8J9 2241 aa11.51□□□□□ -0.57
SF3B6-201ENST00000233468 ZNF487B1APH4 448 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 C1QTNF3-AMACRE9PGA6 284 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 BUB1O43683 1085 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 KRT86O43790 486 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 BUB1BO60566 1050 aaPredicted RBP11.5□□□□□ -0.57
SF3B6-201ENST00000233468 SNAP91O60641 907 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 SIN3BO75182 1162 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 NDUFS2O75306 463 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 EPN2O95208 641 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 ADH1BP00325 375 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 SRCP12931 536 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 ZFXP17010 805 aaPredicted RBP11.5□□□□□ -0.57
SF3B6-201ENST00000233468 COMTP21964 271 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 ACVRL1P37023 503 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 CETN2P41208 172 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 P2RY2P41231 377 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 DPP6P42658 865 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 STK19P49842 368 aaPredicted RBP11.5□□□□□ -0.57
SF3B6-201ENST00000233468 RAD51Q06609 339 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 SERINC3Q13530 473 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 DPYSQ14117 519 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms