RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDCA3-201ENST00000229265 TMEM248Q9NWD8 314 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 ABI2Q9NYB9 513 aaPredicted RBP10.88□□□□□ -0.67
CDCA3-201ENST00000229265 MTRRQ9UBK8 725 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 AFF4Q9UHB7 1163 aaKnown RBP10.88□□□□□ -0.67
CDCA3-201ENST00000229265 STARD13Q9Y3M8 1113 aa10.88□□□□□ -0.67
CDCA3-201ENST00000229265 FRYLO94915 3013 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 CFAP54Q96N23 3096 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 SYNJ2BP-COX16A0A087WUM0 186 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 FAM237BA0A1B0GVD1 139 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 A0A1W2PQH9 124 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 MTMR11A4FU01 709 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 KLF11O14901 512 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 CCL16O15467 120 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 USP1O94782 785 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 KIAA0754O94854 1291 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 ABLIM3O94929 683 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 C1RP00736 705 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 IGLV3-27P01718 113 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 CSH1P0DML2 217 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 CSH2P0DML3 217 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 CCNB1P14635 433 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 VAV1P15498 845 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 HOXB8P17481 243 aaPredicted RBP10.87□□□□□ -0.67
CDCA3-201ENST00000229265 KRT4P19013 534 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 CES1P23141 567 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 CCR2P41597 374 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 MAPKAPK2P49137 400 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 TUBP50607 506 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 GEMP55040 296 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 TMED2Q15363 201 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 PSMD5Q16401 504 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 PDK4Q16654 411 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 KBTBD12Q3ZCT8 623 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 LACTB2Q53H82 288 aaPredicted RBP10.87□□□□□ -0.67
CDCA3-201ENST00000229265 GRTP1Q5TC63 336 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 CWF19L1Q69YN2 538 aaKnown RBP10.87□□□□□ -0.67
CDCA3-201ENST00000229265 UNC5AQ6ZN44 842 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 SH2D5Q6ZV89 423 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 ZNF534Q76KX8 674 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 MARK2Q7KZI7 788 aaKnown RBP10.87□□□□□ -0.67
CDCA3-201ENST00000229265 RTL10Q7L3V2 364 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
CDCA3-201ENST00000229265 TMEM105Q8N8V8 129 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 STKLD1Q8NE28 680 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 ZNF461Q8TAF7 563 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 PLA2G2FQ9BZM2 168 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 ZYG11BQ9C0D3 744 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 ARNT2Q9HBZ2 717 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 ANLNQ9NQW6 1124 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 VPS45Q9NRW7 570 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 COX16Q9P0S2 106 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 KLHL8Q9P2G9 620 aaPredicted RBP10.87□□□□□ -0.67
CDCA3-201ENST00000229265 DNMT3BQ9UBC3 853 aaKnown RBP10.87□□□□□ -0.67
CDCA3-201ENST00000229265 TBK1Q9UHD2 729 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 PRDM4Q9UKN5 801 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 CHMP2BQ9UQN3 213 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 FAM169AQ9Y6X4 670 aa10.87□□□□□ -0.67
CDCA3-201ENST00000229265 WDR27A2RRH5 827 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 KRBA1A5PL33 1030 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 ARHGAP42A6NI28 874 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 E9PAM4 449 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 I6L893 689 aaPredicted RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 MAFKO60675 156 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 MOSPD3O75425 235 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 SOAT2O75908 522 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 TGDSO95455 350 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 LATS1O95835 1130 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 VIMP08670 466 aaKnown RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 CPB1P15086 417 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 CA4P22748 312 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 OR1D2P34982 312 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 ATP5C1P36542 298 aaKnown RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 CORO7P57737 925 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 CDK18Q07002 472 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 MGAT5Q09328 741 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 CDH17Q12864 832 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 DDR2Q16832 855 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 SPDYAQ5MJ70 313 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 UBAP2Q5T6F2 1119 aaKnown RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 HHATQ5VTY9 493 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 TTC19Q6DKK2 380 aaPredicted RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 GRASPQ7Z6J2 395 aaPredicted RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 CHSY1Q86X52 802 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 IGDCC3Q8IVU1 814 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 HS6ST3Q8IZP7 471 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 ADAM32Q8TC27 787 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 NSMCE1Q8WV22 266 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 ATP2A3Q93084 1043 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 FBXO32Q969P5 355 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 TCEAL4Q96EI5 215 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 TRMT2BQ96GJ1 504 aaKnown RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 ZNF599Q96NL3 588 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 DDX50Q9BQ39 737 aaKnown RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 WDR83Q9BRX9 315 aaKnown RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 PITPNM3Q9BZ71 974 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 SFXN1Q9H9B4 322 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 ACTR5Q9H9F9 607 aaPredicted RBP10.86□□□□□ -0.67
CDCA3-201ENST00000229265 NMUR1Q9HB89 426 aa10.86□□□□□ -0.67
CDCA3-201ENST00000229265 MRM3Q9HC36 420 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms