RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 EXOC3L1Q86VI1 746 aa18.08■□□□□ 0.49
EXTL3-201ENST00000220562 KPNA4O00629 521 aaPredicted RBP18.08■□□□□ 0.49
EXTL3-201ENST00000220562 GSTM5P46439 218 aa18.08■□□□□ 0.49
EXTL3-201ENST00000220562 PAGE2BQ5JRK9 111 aa18.08■□□□□ 0.49
EXTL3-201ENST00000220562 CSGALNACT1Q8TDX6 532 aa18.08■□□□□ 0.49
EXTL3-201ENST00000220562 LRRC39Q96DD0 335 aa18.08■□□□□ 0.49
EXTL3-201ENST00000220562 DGCR6LQ9BY27 220 aa18.08■□□□□ 0.49
EXTL3-201ENST00000220562 GLIS2Q9BZE0 524 aaPredicted RBP18.08■□□□□ 0.49
EXTL3-201ENST00000220562 BTBD7Q9P203 1132 aa18.08■□□□□ 0.49
EXTL3-201ENST00000220562 POLR1DQ9Y2S0 133 aa18.08■□□□□ 0.49
EXTL3-201ENST00000220562 ASTN1O14525 1302 aa18.08■□□□□ 0.49
EXTL3-201ENST00000220562 CCDC166P0CW27 439 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 UBA1P22314 1058 aaKnown RBP18.08■□□□□ 0.48
EXTL3-201ENST00000220562 SPIDRQ14159 915 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 ELMO1Q92556 727 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 OLFM1Q99784 485 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 SLITRK2Q9H156 845 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 C15orf41Q9Y2V0 281 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 PCDHGA4Q9Y5G9 962 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 ANKDD1BA6NHY2 528 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 BUD23O43709 281 aaKnown RBP18.08■□□□□ 0.48
EXTL3-201ENST00000220562 GLRA2P23416 452 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 CASP7P55210 303 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 ELF3P78545 371 aaPredicted RBP18.08■□□□□ 0.48
EXTL3-201ENST00000220562 FAM187BQ17R55 369 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 FBXL19Q6PCT2 694 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 REEP1Q9H902 201 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 MRPL17Q9NRX2 175 aaKnown RBP18.08■□□□□ 0.48
EXTL3-201ENST00000220562 ZNF135P52742 658 aaPredicted RBP18.08■□□□□ 0.48
EXTL3-201ENST00000220562 ZNF143P52747 638 aaPredicted RBP18.08■□□□□ 0.48
EXTL3-201ENST00000220562 NEPROQ6NW34 567 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 PALB2Q86YC2 1186 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 UBASH3BQ8TF42 649 aa18.08■□□□□ 0.48
EXTL3-201ENST00000220562 TNPO3Q9Y5L0 923 aaKnown RBP18.08■□□□□ 0.48
EXTL3-201ENST00000220562 SMIM22K7EJ46 135 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 GNA13Q14344 377 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ZSWIM7Q19AV6 140 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 STXBP5Q5T5C0 1151 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 CDC73Q6P1J9 531 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 TMC5Q6UXY8 1006 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 C16orf62Q7Z3J2 963 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 MAGEC3Q8TD91 643 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 SPACA7Q96KW9 195 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 MBOAT7Q96N66 472 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 NDNQ99608 321 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 PRDM16Q9HAZ2 1276 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ZFYVE1Q9HBF4 777 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 VPS45Q9NRW7 570 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.07■□□□□ 0.48
EXTL3-201ENST00000220562 CCR4P51679 360 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ACSM2AQ08AH3 577 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ACSM2BQ68CK6 577 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 PCDHGC5Q9Y5F6 944 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 C15orf38-AP3S2A0A0A6YYH1 394 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 NPR3P17342 541 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 NTSP30990 170 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ABL2P42684 1182 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 POLD2P49005 469 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 SQLEQ14534 574 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 IQSEC1Q6DN90 963 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ARPINQ7Z6K5 226 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ENKURQ8TC29 256 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 LRRN4Q8WUT4 740 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 SELENOMQ8WWX9 145 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ZNF624Q9P2J8 865 aaPredicted RBP18.07■□□□□ 0.48
EXTL3-201ENST00000220562 SLC9A8Q9Y2E8 581 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ATP5C1P36542 298 aaKnown RBP18.07■□□□□ 0.48
EXTL3-201ENST00000220562 TAF5Q15542 800 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 CNGA2Q16280 664 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 CKAP2Q8WWK9 683 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 OR6A2O95222 327 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 STAG3L4Q8TBR4 150 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 COPS5Q92905 334 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 IDI2Q9BXS1 227 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 KCNMB3Q9NPA1 279 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 CHKBQ9Y259 395 aa18.07■□□□□ 0.48
EXTL3-201ENST00000220562 ZMPSTE24O75844 475 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 TNFRSF8P28908 595 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 MIIPQ5JXC2 388 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 CLYBLQ8N0X4 340 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 FLCNQ8NFG4 579 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 CEP44Q9C0F1 390 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 MORF4L1Q9UBU8 362 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 TNFSF9P41273 254 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 C21orf59P57076 290 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 DACT2Q5SW24 774 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 UNC5AQ6ZN44 842 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 C8orf59Q8N0T1 100 aaPredicted RBP18.06■□□□□ 0.48
EXTL3-201ENST00000220562 PTGR2Q8N8N7 351 aaPredicted RBP18.06■□□□□ 0.48
EXTL3-201ENST00000220562 CXorf40AQ8TE69 158 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 SNRNP25Q9BV90 132 aaKnown RBP18.06■□□□□ 0.48
EXTL3-201ENST00000220562 ZMYND8Q9ULU4 1186 aaPredicted RBP18.06■□□□□ 0.48
EXTL3-201ENST00000220562 SNX6Q9UNH7 406 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 NCANO14594 1321 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 CHKAP35790 457 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 EIF2B2P49770 351 aaKnown RBP18.06■□□□□ 0.48
EXTL3-201ENST00000220562 GRIP2Q9C0E4 1043 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 TMEM216Q9P0N5 145 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 CHURC1-FNTBB4DL54 471 aa18.06■□□□□ 0.48
EXTL3-201ENST00000220562 PSMD10O75832 226 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms