RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 DTLQ9NZJ0 730 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 VPS18Q9P253 973 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 OR12D3Q9UGF7 316 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 ZMIZ1Q9ULJ6 1067 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.4
SNU13-201ENST00000215956 PCDHGA5Q9Y5G8 931 aa12.52□□□□□ -0.4
SNU13-201ENST00000215956 CCDC163A0A0D9SF12 145 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 TTC4O95801 387 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 ERCC2P18074 760 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 RBL1P28749 1068 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 EPHB2P29323 1055 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 PHBP35232 272 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 MPLP40238 635 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 PXNP49023 591 aaPredicted RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 GDF10P55107 478 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 TBX4P57082 545 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 CDK16Q00536 496 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 GBE1Q04446 702 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 PLD1Q13393 1074 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 HIF1AQ16665 826 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 KRT71Q3SY84 523 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 STXBP5Q5T5C0 1151 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 RNF43Q68DV7 783 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 LRRC49Q8IUZ0 686 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 ARID3BQ8IVW6 561 aaPredicted RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 PYROXD2Q8N2H3 581 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 HTR3CQ8WXA8 447 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 PRCCQ92733 491 aaPredicted RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 EXOC4Q96A65 974 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 TBC1D31Q96DN5 1066 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 ATP6V1G3Q96LB4 118 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 C1orf74Q96LT6 269 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 RBM15Q96T37 977 aaKnown RBP eCLIP12.51□□□□□ -0.416e-8■■■□□ 14.7
SNU13-201ENST00000215956 VAT1Q99536 393 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 CDC42EP4Q9H3Q1 356 aaKnown RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 SMOC1Q9H4F8 434 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 USP29Q9HBJ7 922 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 TMBIM4Q9HC24 238 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 GMIPQ9P107 970 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 DMXL2Q8TDJ6 3036 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 DSPP15924 2871 aaKnown RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 OPHN1O60890 802 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 HOXB3P14651 431 aaPredicted RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 ETS1P14921 441 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 MAGEA4P43358 317 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 MAGEA6P43360 314 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 ALDH1A3P47895 512 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 RING1Q06587 406 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 ZNF844Q08AG5 666 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 DUSP4Q13115 394 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 SLC29A2Q14542 456 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 STAT4Q14765 748 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 TRIP4Q15650 581 aaPredicted RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 TAF12Q16514 161 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 DNAJC21Q5F1R6 531 aaKnown RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 ARHGEF18Q6ZSZ5 1173 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 CNPY4Q8N129 248 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 NAT8LQ8N9F0 302 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 STKLD1Q8NE28 680 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 CPT1BQ92523 772 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 LRRC3BQ96PB8 259 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 RETREG1Q9H6L5 497 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNU13-201ENST00000215956 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 XPO7Q9UIA9 1087 aaKnown RBP12.51□□□□□ -0.41
SNU13-201ENST00000215956 NFS1Q9Y697 457 aa12.51□□□□□ -0.41
SNU13-201ENST00000215956 DENND4CQ5VZ89 1909 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 A0A087WUV0 522 aaPredicted RBP12.5□□□□□ -0.41
SNU13-201ENST00000215956 A0A0A0MRY4 1105 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 E7EVH7 732 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 ALOX15BO15296 676 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 TP73O15350 636 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 MFSD11O43934 449 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 SPAG6O75602 509 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 LRIG2O94898 1065 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 VNN2O95498 520 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 CHKAP35790 457 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 GPR15P49685 360 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 EPHB3P54753 998 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 TNK2Q07912 1038 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 TAF10Q12962 218 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 CBLBQ13191 982 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 PRKD1Q15139 912 aaPredicted RBP12.5□□□□□ -0.41
SNU13-201ENST00000215956 NUGGCQ68CJ6 796 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 RIBC1Q8N443 379 aaPredicted RBP12.5□□□□□ -0.41
SNU13-201ENST00000215956 GLIS1Q8NBF1 620 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 MCUQ8NE86 351 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 HDAC11Q96DB2 347 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 SPATA13Q96N96 652 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 PPP1R2P1Q96PQ5 205 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 CRISPLD1Q9H336 500 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 NMUR1Q9HB89 426 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 SAYSD1Q9NPB0 183 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 RAB6BQ9NRW1 208 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 VPS45Q9NRW7 570 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 OBP2AQ9NY56 170 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms