RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Pitpnm2Q6ZPQ6 1335 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Uggt1Q6P5E4 1551 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Myo3aQ8K3H5 1613 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Gm4778L7N229 365 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Vmn2r39L7N2E5 861 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 H2-Eb1P04230 264 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Serac1Q3U213 654 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Med22Q62276 200 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Tmem59lQ7TNI2 337 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Rnaseh2bQ80ZV0 308 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Cdhr5Q8VHF2 831 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 GhdcQ99J23 532 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ddit4Q9D3F7 229 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Med8Q9D7W5 268 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Smok3cA0A087WSF2 504 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 H2-M9O19442 342 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ugt1a2P70691 533 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ugt1a1Q63886 535 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Scaf8Q6DID3 1268 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Aspscr1Q8VBT9 550 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Slc5a5Q99PN0 618 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ift46Q9DB07 301 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Gm3147A0A0J9YU88 481 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Gm10424A0A0J9YVD0 481 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Gm7971J3QMM8 481 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ints6Q6PCM2 883 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 RragdQ7TT45 449 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Mrpl48Q8JZS9 211 aaKnown RBP15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Stk32cQ8QZV4 488 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Pcdhgb1Q91XX8 918 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Adgre4Q91ZE5 689 aa15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 HnrnpdlQ9Z130 301 aaKnown RBP15.88■□□□□ 0.13
Ubr3-201ENSMUST00000055758 4930503B20RikQ80ZP0 234 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Sephs1Q8BH69 392 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Oxnad1Q8VE38 311 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 TfQ921I1 697 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Edf1Q9JMG1 148 aaKnown RBP15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Tmem59Q9QY73 323 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Marcksl1P28667 200 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Rad51Q08297 339 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Tfap2dQ91ZK0 452 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Klhl1Q9JI74 751 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ptges3Q9R0Q7 160 aaKnown RBP15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 1700003F12RikA2AKE5 210 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Cyp2d10P24456 504 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Lima1Q9ERG0 753 aaKnown RBP15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Smpd3Q9JJY3 655 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 MycsQ9Z304 431 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Fam208aQ69ZR9 1610 aaKnown RBP15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Cyp2j12G3UXT0 502 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Gm3383J3QQ59 259 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Gm3239L7N2D9 227 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Kcnu1O54982 1121 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 B3gat3P58158 335 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Q3KQP7 184 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ttf1Q62187 859 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Dusp4Q8BFV3 398 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Dhx32Q8BZS9 744 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Fbxo32Q9CPU7 355 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ttc23lA6H6E9 458 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Foxn2E9Q7L6 429 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 AvilO88398 819 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 AlbP07724 608 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Hpcal1P62748 193 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Pan2Q8BGF7 1200 aaKnown RBP15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Btbd9Q8C726 612 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ints5Q8CHT3 1018 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Tmem168Q91VX9 697 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Q922M7 232 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ist1Q9CX00 362 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Trpv5P69744 723 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Spata20Q80YT5 790 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Msh4Q99MT2 958 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Hnrnpa0Q9CX86 305 aaKnown RBP15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Q9D2Q3 444 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Arhgef11Q68FM7 1552 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Unc13cQ8K0T7 2210 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Mybpc1D3YU50 1127 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 DctP29812 517 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Olfr392Q7TRX6 312 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Pgam1Q9DBJ1 254 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 PfasQ5SUR0 1337 aa15.87■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Rreb1Q3UH06 1700 aaKnown RBP15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Mtx3D3YTP3 312 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Camk2bP28652 542 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Cyp2c39P56656 490 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Mup20Q5FW60 181 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Fam131aQ8BWU3 361 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 BroxQ8K2Q7 411 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Birc5O70201 140 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 S100a15aQ6S5I3 108 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Sytl5Q80T23 753 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Dcun1d5Q9CXV9 237 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Fam111aQ9D2L9 613 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Fam187aQ9D3R5 417 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Ssxb9A2BI93 185 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 AK157302I3ITR1 129 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Lpcat1Q3TFD2 534 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 Otol1Q4ZJM7 482 aa15.86■□□□□ 0.13
Ubr3-201ENSMUST00000055758 MafkQ61827 156 aa15.86■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms