RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 IL21Q9HBE4 155 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 NKIRAS1Q9NYS0 192 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 MPP6Q9NZW5 540 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 CXXC1Q9P0U4 656 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 SEPT3Q9UH03 358 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 TBC1D30Q9Y2I9 924 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 SH3BP1Q9Y3L3 701 aa9.91□□□□□ -0.82
PHGDH-215ENST00000641371 NYNRINQ9P2P1 1898 aaKnown RBP9.91□□□□□ -0.82
PHGDH-215ENST00000641371 HELZP42694 1942 aaKnown RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 FAM159BA6NKW6 160 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 SNRPAP09012 282 aaKnown RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 TCF3P15923 654 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 PTPN2P17706 415 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 CA4P22748 312 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 HADHAP40939 763 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 SLCO1A2P46721 670 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 KCNQ1P51787 676 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 CLCN4P51793 760 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 NRLP54845 237 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 GNGT1P63211 74 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 SMAD3P84022 425 aaKnown RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 MLLT1Q03111 559 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 SLC12A1Q13621 1099 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF235Q14590 738 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 LBRQ14739 615 aaKnown RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 TMED2Q15363 201 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 ALFQ53S48 1182 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 PLPP4Q5VZY2 271 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 ALG1LQ6GMV1 187 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 NADSYN1Q6IA69 706 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 UNC5AQ6ZN44 842 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 Q6ZNB5 142 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 HTR3DQ70Z44 454 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 MARK2Q7KZI7 788 aaKnown RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 NLRP9Q7RTR0 991 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 TFAP2DQ7Z6R9 452 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 TRABD2AQ86V40 505 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 EXOC3L1Q86VI1 746 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 DENND1CQ8IV53 801 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 TAB3Q8N5C8 712 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 AUTS2Q8WXX7 1259 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 USP13Q92995 863 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 IGSF8Q969P0 613 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 PPP2R3CQ969Q6 453 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 HMCESQ96FZ2 354 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 CFAP36Q96G28 342 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 CDCA3Q99618 268 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 TBL1YQ9BQ87 522 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 CCDC134Q9H6E4 229 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 NOL6Q9H6R4 1146 aaKnown RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 ARNT2Q9HBZ2 717 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 TRPC7Q9HCX4 862 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 INTS9Q9NV88 658 aaKnown RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 MOCS1Q9NZB8 636 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 TXNDC16Q9P2K2 825 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 AGO1Q9UL18 857 aaKnown RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 ARHGAP26Q9UNA1 814 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 TTLL3Q9Y4R7 772 aa9.9□□□□□ -0.82
PHGDH-215ENST00000641371 ARIH1Q9Y4X5 557 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-215ENST00000641371 MIA3Q5JRA6 1907 aa9.9□□□□□ -0.83
PHGDH-215ENST00000641371 E2F8A0AVK6 867 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 FAM47DPA6NHR8 397 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 TM9SF1O15321 606 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 KDELR3O43731 214 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 CNTN5O94779 1100 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 ZWINTO95229 277 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 LUC7L3O95232 432 aaKnown RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 CYBBP04839 570 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 CKMP06732 381 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 BRAFP15056 766 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 HLA-DPA1P20036 260 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 ERVK-21P61565 698 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 GAD2Q05329 585 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 MGAT5Q09328 741 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 MPPE1Q53F39 396 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 PCID2Q5JVF3 399 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 TMEM150AQ86TG1 271 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 TMEM135Q86UB9 458 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 CNTD1Q8N815 330 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 PPHLN1Q8NEY8 458 aaKnown RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 ACMSDQ8TDX5 336 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 MICAL1Q8TDZ2 1067 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 DEPDC1BQ8WUY9 529 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 OTUB2Q96DC9 234 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 PABPC5Q96DU9 382 aaKnown RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 TMA16Q96EY4 203 aaKnown RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 IMP4Q96G21 291 aaKnown RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 ZFRQ96KR1 1074 aaKnown RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 RANBP9Q96S59 729 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 SELENOSQ9BQE4 189 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 WDR83Q9BRX9 315 aaKnown RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 LRRC3Q9BY71 257 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 NSRP1Q9H0G5 558 aaKnown RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 ATXN3LQ9H3M9 355 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 TASP1Q9H6P5 420 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 KIF9Q9HAQ2 790 aa9.89□□□□□ -0.83
PHGDH-215ENST00000641371 ZNF334Q9HCZ1 680 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-215ENST00000641371 TBC1D14Q9P2M4 693 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms