RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 RABGAP1LQ5R372 815 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 DENND1CQ8IV53 801 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 LRRC34Q8IZ02 419 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 TBL1YQ9BQ87 522 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 ZBP1Q9H171 429 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 ENTPD7Q9NQZ7 604 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 INSL6Q9Y581 213 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 DOCK4Q8N1I0 1966 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 FAM237BA0A1B0GVD1 139 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 J3KR12 359 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 IL10RBQ08334 325 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 MGAT5Q09328 741 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 PABPC1LQ4VXU2 614 aaKnown RBP17.59■□□□□ 0.41
PHGDH-208ENST00000641023 FAM133BQ5BKY9 247 aaKnown RBP17.59■□□□□ 0.41
PHGDH-208ENST00000641023 CERCAMQ5T4B2 595 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 MARK2Q7KZI7 788 aaKnown RBP17.59■□□□□ 0.41
PHGDH-208ENST00000641023 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.59■□□□□ 0.41
PHGDH-208ENST00000641023 IPMKQ8NFU5 416 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 CERS2Q96G23 380 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 KLF6Q99612 283 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-208ENST00000641023 FSD1LQ9BXM9 530 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 ZFATQ9P243 1243 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 PCDH10Q9P2E7 1040 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 TCP11X1B4DZS4 312 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 UGT1A9O60656 530 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 LPXNO60711 386 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 STC2O76061 302 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 OAS1P00973 400 aaKnown RBP17.59■□□□□ 0.41
PHGDH-208ENST00000641023 SLC6A4P31645 630 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 CDH4P55283 916 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 SLC18A2Q05940 514 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 NIPAL4Q0D2K0 466 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 MPP3Q13368 585 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 SERINC3Q13530 473 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 QPCTQ16769 361 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 HHATQ5VTY9 493 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 RFWD3Q6PCD5 774 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 MICALCLQ6ZW33 695 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 CIR1Q86X95 450 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-208ENST00000641023 UNC5BQ8IZJ1 945 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 TCP10LQ8TDR4 215 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 ZNF669Q96BR6 464 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-208ENST00000641023 SERAC1Q96JX3 654 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 TGS1Q96RS0 853 aaKnown RBP17.59■□□□□ 0.41
PHGDH-208ENST00000641023 RNF38Q9H0F5 515 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 SLC25A51Q9H1U9 297 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 UGT1A7Q9HAW7 530 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 UGT1A10Q9HAW8 530 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 UGT1A8Q9HAW9 530 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 TXNDC16Q9P2K2 825 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 FAM169AQ9Y6X4 670 aa17.59■□□□□ 0.41
PHGDH-208ENST00000641023 C2orf78A6NCI8 922 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 PYGBP11216 843 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 CORO1AP31146 461 aaKnown RBP17.58■□□□□ 0.4
PHGDH-208ENST00000641023 FPGSQ05932 587 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 ITKQ08881 620 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 SLC10A7Q0GE19 358 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 FRG1Q14331 258 aaKnown RBP17.58■□□□□ 0.4
PHGDH-208ENST00000641023 CES3Q6UWW8 571 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 CFAP52Q8N1V2 620 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 GKN1Q9NS71 199 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 SOX13Q9UN79 622 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 ASB3Q9Y575 518 aa17.58■□□□□ 0.4
PHGDH-208ENST00000641023 ZFP37Q9Y6Q3 630 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-208ENST00000641023 NYNRINQ9P2P1 1898 aaKnown RBP17.58■□□□□ 0.4
PHGDH-208ENST00000641023 CNPP09543 421 aaKnown RBP17.57■□□□□ 0.4
PHGDH-208ENST00000641023 TPH1P17752 444 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 DNAJC3Q13217 504 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 ANKRD20A4Q4UJ75 823 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 LVRNQ6Q4G3 990 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 SH2D5Q6ZV89 423 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 TEX26Q8N6G2 289 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 CLP1Q92989 425 aaKnown RBP17.57■□□□□ 0.4
PHGDH-208ENST00000641023 MYEOVQ96EZ4 313 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 APOPT1Q96IL0 206 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 SEC16BQ96JE7 1060 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 FCRL3Q96P31 734 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-208ENST00000641023 DDX50Q9BQ39 737 aaKnown RBP17.57■□□□□ 0.4
PHGDH-208ENST00000641023 KLF16Q9BXK1 252 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-208ENST00000641023 IQCGQ9H095 443 aaKnown RBP17.57■□□□□ 0.4
PHGDH-208ENST00000641023 MAGEH1Q9H213 219 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 NT5MQ9NPB1 228 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 CHRAC1Q9NRG0 131 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 VPS45Q9NRW7 570 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 GGA2Q9UJY4 613 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 TGM5O43548 720 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 PMPCBO75439 489 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 CLDN11O75508 207 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 TNK2Q07912 1038 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 SLC1A5Q15758 541 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 PCID2Q5JVF3 399 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 ADGRF1Q5T601 910 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 MROH9Q5TGP6 573 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 TMC7Q7Z402 723 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 CCDC117Q8IWD4 279 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-208ENST00000641023 CACNA2D3Q8IZS8 1091 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 KLHL23Q8NBE8 558 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 BADQ92934 168 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 KLHL5Q96PQ7 755 aa17.57■□□□□ 0.4
PHGDH-208ENST00000641023 FICDQ9BVA6 458 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms