RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 PHTF2Q8N3S3 785 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 CPSF7Q8N684 471 aaKnown RBP12.96□□□□□ -0.33
TCF4-289ENST00000637941 KYQ8NBH2 561 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 PDCD6IPQ8WUM4 868 aaKnown RBP12.96□□□□□ -0.33
TCF4-289ENST00000637941 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 TEKT5Q96M29 485 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 TINF2Q9BSI4 451 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 MCMBPQ9BTE3 642 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 KIFC1Q9BW19 673 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 GATA5Q9BWX5 397 aaPredicted RBP12.96□□□□□ -0.33
TCF4-289ENST00000637941 DDIT4Q9NX09 232 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 CDYLQ9Y232 598 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 IPPQ9Y573 584 aa12.96□□□□□ -0.33
TCF4-289ENST00000637941 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 BTBD19C9JJ37 291 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 CLGNO14967 610 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 ZBTB14O43829 449 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 USP12O75317 370 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 AP1G2O75843 785 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 NCAM1P13591 858 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 PIK3R1P27986 724 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 PPARGP37231 505 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 CRYBB1P53674 252 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 SOX4Q06945 474 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 MFSD10Q14728 455 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 FNDC1Q4ZHG4 1894 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 UBXN11Q5T124 520 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 ARMC3Q5W041 872 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 CWF19L1Q69YN2 538 aaKnown RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 ANKRD23Q86SG2 305 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 KBTBD6Q86V97 674 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 HPS6Q86YV9 775 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 GABPB2Q8TAK5 448 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 PTCD2Q8WV60 388 aaKnown RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 IRGQQ8WZA9 623 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 MFSD3Q96ES6 412 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 SCYL1Q96KG9 808 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 TSGA13Q96PP4 275 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 MLPHQ9BV36 600 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 EBF3Q9H4W6 596 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 WDCPQ9H6R7 721 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 GOLGA2P5Q9HBQ8 144 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 SLC39A10Q9ULF5 831 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 PSMD13Q9UNM6 376 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 SHROOM3Q8TF72 1996 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 FAM72CH0Y354 149 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 ADCY6O43306 1168 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 ANXA9O76027 345 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 BEST1O76090 585 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 CD68P34810 354 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 HTR7P34969 479 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 SERPINB5P36952 375 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 NUDT2P50583 147 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 IRF9Q00978 393 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 DYNC1I2Q13409 638 aaKnown RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 CYLC2Q14093 348 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 GRB14Q14449 540 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 USP10Q14694 798 aaKnown RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 MMEL1Q495T6 779 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 RAB41Q5JT25 222 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 PCID2Q5JVF3 399 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 CERCAMQ5T4B2 595 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 FAM72AQ5TYM5 149 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 WSCD1Q658N2 575 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 FAM72DQ6L9T8 149 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 NAPRTQ6XQN6 538 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 BNC2Q6ZN30 1099 aaPredicted RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 HFE2Q6ZVN8 426 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 FAM35AQ86V20 835 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 FAM72BQ86X60 149 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 NETO2Q8NC67 525 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 DNAJB3Q8WWF6 145 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 DLG3Q92796 817 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 TUBGCP5Q96RT8 1024 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 COLEC11Q9BWP8 271 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 SHCBP1LQ9BZQ2 653 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 MRPL40Q9NQ50 206 aaKnown RBP12.95□□□□□ -0.34
TCF4-289ENST00000637941 NDUFA13Q9P0J0 144 aa12.95□□□□□ -0.34
TCF4-289ENST00000637941 E2F8A0AVK6 867 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 TRPC5OSA6NMA1 111 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 UPP2O95045 317 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 FYNP06241 537 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 ZCCHC18P0CG32 403 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 PAMP19021 973 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 GRIA4P48058 902 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 CXCR3P49682 368 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 CSRP3P50461 194 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 ERFP50548 548 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 SMAD1Q15797 465 aaKnown RBP12.94□□□□□ -0.34
TCF4-289ENST00000637941 TCHHL1Q5QJ38 904 aaPredicted RBP12.94□□□□□ -0.34
TCF4-289ENST00000637941 ATG14Q6ZNE5 492 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 ZC3HC1Q86WB0 502 aaKnown RBP12.94□□□□□ -0.34
TCF4-289ENST00000637941 KLHDC8BQ8IXV7 354 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 AFAP1L2Q8N4X5 818 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 C2orf69Q8N8R5 385 aa12.94□□□□□ -0.34
TCF4-289ENST00000637941 PPHLN1Q8NEY8 458 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms