RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 DERAQ9Y315 318 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 NOC2LQ9Y3T9 749 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 TRPV2Q9Y5S1 764 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 LYVE1Q9Y5Y7 322 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 COL15A1P39059 1388 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 DHX29Q7Z478 1369 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 CYP3A7-CYP3A51PA0A087WV96 503 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 A0A088AWK7 358 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 C15orf38-AP3S2A0A0A6YYH1 394 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 A0A1B0GWJ7 208 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 A0A1W2PQ09 198 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 A0A1W2PQ27 194 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 A0A1W2PQ64 194 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 A0A1W2PQC6 194 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 A0A1W2PQD8 194 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 SYCE3A1L190 88 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 FRMD3A2A2Y4 597 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 PTPDC1A2A3K4 754 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 GOLGA6L4A6NEF3 574 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 URADA6NGE7 173 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 MROH6A6NGR9 719 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 NPIPB8E9PQR5 432 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 K7ERQ8 282 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 PODXLO00592 558 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 AQP7O14520 342 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ATP2A1O14983 1001 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 PER2O15055 1255 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 TP73O15350 636 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 HNRNPRO43390 633 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 KRT86O43790 486 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 B4GALT3O60512 393 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ENTPD3O75355 529 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CLN5O75503 358 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CRTAPO75718 401 aaPredicted RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 KRT37O76014 449 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 SEC31AO94979 1220 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 C22orf31O95567 290 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CAVIN2O95810 425 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 IL1AP01583 271 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 TK1P04183 234 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 URODP06132 367 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 GLAP06280 429 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CKMP06732 381 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 IVLP07476 585 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ASNSP08243 561 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 MYBL1P10243 752 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 KRT4P19013 534 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 RXRAP19793 462 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CYP3A7P24462 503 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 MCM3P25205 808 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 AOAHP28039 575 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 MCM7P33993 719 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 TRIM23P36406 574 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 BMPR1AP36894 532 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 PTGER3P43115 390 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CAPZA2P47755 286 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 STARP49675 285 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 HSD17B4P51659 736 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 PMS2P54278 862 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 PNLIPRP1P54315 467 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 NPEPPSP55786 919 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ZNF445P59923 1031 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ACTR2P61160 394 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 RPS3AP61247 264 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 RAB1AP62820 205 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 PRAMEP78395 509 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ST5P78524 1137 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 FAM189BP81408 668 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CDK17Q00537 523 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 PMP22Q01453 160 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 FMO1Q01740 532 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 LIPEQ05469 1076 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.1□□□□□ -1.91
VIM-210ENST00000637053 THOC5Q13769 683 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 PTK6Q13882 451 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ARHGAP19Q14CB8 494 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 SEC23BQ15437 767 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 BAK1Q16611 211 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 TWISTNBQ3B726 338 aaPredicted RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 TMEM177Q53S58 311 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 HS1BP3Q53T59 392 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 HSP90AA4PQ58FG1 418 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 IGSF11Q5DX21 431 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ZRANB3Q5FWF4 1079 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 TOR2AQ5JU69 321 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 NDUFAF5Q5TEU4 345 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ATG16L1Q676U5 607 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 THOC7Q6I9Y2 204 aaKnown RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 ETFRF1Q6IPR1 90 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 KRT80Q6KB66 452 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CYP4F22Q6NT55 531 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 BORAQ6PGQ7 559 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 FAM111BQ6SJ93 734 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 METAP1DQ6UB28 335 aaPredicted RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 TMEM270Q6UE05 265 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 CYP20A1Q6UW02 462 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 KDM7AQ6ZMT4 941 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 ZNF704Q6ZNC4 412 aaPredicted RBP3.1□□□□□ -1.91
VIM-210ENST00000637053 CATSPERGQ6ZRH7 1159 aa3.1□□□□□ -1.91
VIM-210ENST00000637053 LINC00696Q6ZRV3 163 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms