RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 NAPEPLDQ6IQ20 393 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 OXR1Q8N573 874 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 EMC1Q8N766 993 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 KDF1Q8NAX2 398 aaPredicted RBP18.35■□□□□ 0.53
PNKP-225ENST00000636214 PPP1R16AQ96I34 528 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 ELF4Q99607 663 aaPredicted RBP18.35■□□□□ 0.53
PNKP-225ENST00000636214 SELENOOQ9BVL4 669 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 PREBQ9HCU5 417 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 ATP13A1Q9HD20 1204 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 TMPRSS4Q9NRS4 437 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 FTSJ1Q9UET6 329 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 PPM1HQ9ULR3 514 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 DMTF1Q9Y222 760 aa18.35■□□□□ 0.53
PNKP-225ENST00000636214 AKAP13Q12802 2813 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 IGLV3-10A0A075B6K4 115 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 A0A1B0GTQ1 180 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 ANKRD62A6NC57 917 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 LGALS16A8MUM7 142 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 TNFSF14O43557 240 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 CALB1P05937 261 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 ITGAVP06756 1048 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 CCDC172P0C7W6 258 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 MAT2AP31153 395 aaKnown RBP18.34■□□□□ 0.53
PNKP-225ENST00000636214 CHRNA3P32297 505 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 JAM2P57087 298 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 KCNT1Q5JUK3 1230 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 CCDC183Q5T5S1 534 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 RWDD4Q6NW29 188 aaKnown RBP18.34■□□□□ 0.53
PNKP-225ENST00000636214 C22orf39Q6P5X5 142 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 LINGO4Q6UY18 593 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 DBX2Q6ZNG2 339 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 PHLDB2Q86SQ0 1253 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 TRIM69Q86WT6 500 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 DRC7Q8IY82 874 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 SLC30A5Q8TAD4 765 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 BAHD1Q8TBE0 780 aaPredicted RBP18.34■□□□□ 0.53
PNKP-225ENST00000636214 PSMB7Q99436 277 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 ADAM22Q9P0K1 906 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 LIMA1Q9UHB6 759 aaKnown RBP18.34■□□□□ 0.53
PNKP-225ENST00000636214 SARDHQ9UL12 918 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 BTBD3Q9Y2F9 522 aa18.34■□□□□ 0.53
PNKP-225ENST00000636214 A0A0D9SEW6 157 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 TLR4O00206 839 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 LATO43561 262 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 MT-CO1P00395 513 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 KRT3P12035 628 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 DNA2P51530 1060 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 METAP1P53582 386 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 STAT4Q14765 748 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 CCDC157Q569K6 752 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 AGBL4Q5VU57 503 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 TRNP1Q6NT89 227 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 ZNF683Q8IZ20 524 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 TMIEQ8NEW7 156 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 OR7D4Q8NG98 312 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 RXFP2Q8WXD0 754 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 TMEM121BQ9BXQ6 578 aaPredicted RBP18.33■□□□□ 0.52
PNKP-225ENST00000636214 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.52
PNKP-225ENST00000636214 EBF2Q9HAK2 575 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 PPARGC1AQ9UBK2 798 aaKnown RBP18.33■□□□□ 0.52
PNKP-225ENST00000636214 OR12D3Q9UGF7 316 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 SIK3Q9Y2K2 1263 aa18.33■□□□□ 0.52
PNKP-225ENST00000636214 FAM208BQ5VWN6 2430 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 I6L893 689 aaPredicted RBP18.32■□□□□ 0.52
PNKP-225ENST00000636214 EPHB6O15197 1021 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 WNT1P04628 370 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 ATXN1LP0C7T5 689 aaKnown RBP18.32■□□□□ 0.52
PNKP-225ENST00000636214 GNA12Q03113 381 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 SLC20A2Q08357 652 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 OVGP1Q12889 678 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 C15orf59Q2T9L4 293 aaPredicted RBP18.32■□□□□ 0.52
PNKP-225ENST00000636214 STRADAQ7RTN6 431 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 BNIPLQ7Z465 357 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 SLCO6A1Q86UG4 719 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 GALNT15Q8N3T1 639 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 MFSD2AQ8NA29 543 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 GRIN3AQ8TCU5 1115 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 FAM131CQ96AQ9 280 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 CEP44Q9C0F1 390 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 TNKS2Q9H2K2 1166 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 IL36AQ9UHA7 158 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 HPCAL4Q9UM19 191 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 KNTC1P50748 2209 aa18.32■□□□□ 0.52
PNKP-225ENST00000636214 ACACAQ13085 2346 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 A0A1W2PR77 199 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 FAM221BA6H8Z2 402 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 PRAMEF26H0Y7S4 382 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 K7ERQ8 282 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 RNGTTO60942 597 aaKnown RBP18.31■□□□□ 0.52
PNKP-225ENST00000636214 ENDOD1O94919 500 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 CHRNB2P17787 502 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 PTPN9P43378 593 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 MAPKAPK2P49137 400 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 SERPINH1P50454 418 aaKnown RBP18.31■□□□□ 0.52
PNKP-225ENST00000636214 GEMIN4P57678 1058 aaKnown RBP18.31■□□□□ 0.52
PNKP-225ENST00000636214 NXPH1P58417 271 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 CCDC14Q49A88 953 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 PRAMEF14Q5SWL7 426 aa18.31■□□□□ 0.52
PNKP-225ENST00000636214 IQCHQ86VS3 1027 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms