RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 BYSLQ13895 437 aaKnown RBP9.94□□□□□ -0.82
LINC00339-210ENST00000635675 DPYSL3Q14195 570 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 PDK2Q15119 407 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 ACCSLQ4AC99 568 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 KIAA1324Q6UXG2 1013 aaKnown RBP9.94□□□□□ -0.82
LINC00339-210ENST00000635675 LRRC8AQ8IWT6 810 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 ARHGAP12Q8IWW6 846 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 FAM160A2Q8N612 972 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-210ENST00000635675 NPWQ8N729 165 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 KCTD6Q8NC69 237 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 TPCN2Q8NHX9 752 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 PRCCQ92733 491 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-210ENST00000635675 FAM122AQ96E09 287 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 CALR3Q96L12 384 aaKnown RBP9.94□□□□□ -0.82
LINC00339-210ENST00000635675 DESI2Q9BSY9 194 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 SLC39A8Q9C0K1 460 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 ETNK2Q9NVF9 386 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 USP36Q9P275 1121 aaKnown RBP9.94□□□□□ -0.82
LINC00339-210ENST00000635675 MBD1Q9UIS9 605 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-210ENST00000635675 HPCAL4Q9UM19 191 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 ACTL7AQ9Y615 435 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 ALG6Q9Y672 507 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
LINC00339-210ENST00000635675 SPAG17Q6Q759 2223 aa9.94□□□□□ -0.82
LINC00339-210ENST00000635675 PRR23AA6NEV1 266 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 ZSCAN5CA6NGD5 496 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-210ENST00000635675 MCF2LO15068 1137 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 BCKDHBP21953 392 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 GJC1P36383 396 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 PAPOLAP51003 745 aaKnown RBP9.93□□□□□ -0.82
LINC00339-210ENST00000635675 TPMTP51580 245 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 GEMIN4P57678 1058 aaKnown RBP9.93□□□□□ -0.82
LINC00339-210ENST00000635675 KRT81Q14533 505 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 ELAVL3Q14576 367 aaKnown RBP9.93□□□□□ -0.82
LINC00339-210ENST00000635675 PLK5Q496M5 336 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 ANKRD20A8PQ5CZ79 823 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 ZNF776Q68DI1 518 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-210ENST00000635675 C11orf63Q6NUN7 778 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 PRR23BQ6ZRT6 265 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 Q6ZVU0 165 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 CEP68Q76N32 757 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 ASCL5Q7RTU5 278 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 KBTBD6Q86V97 674 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 C11orf74Q86VG3 221 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 MAP7D3Q8IWC1 876 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 STK40Q8N2I9 435 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 LZTR1Q8N653 840 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 CCDC112Q8NEF3 446 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 OR2A12Q8NGT7 310 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 PCDH19Q8TAB3 1148 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 RAPGEF5Q92565 580 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 ISG20Q96AZ6 181 aaKnown RBP9.93□□□□□ -0.82
LINC00339-210ENST00000635675 FAF2Q96CS3 445 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 CELF6Q96J87 481 aaKnown RBP9.93□□□□□ -0.82
LINC00339-210ENST00000635675 ZNF670Q9BS34 389 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 CEP44Q9C0F1 390 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 DUSP15Q9H1R2 295 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-210ENST00000635675 KCNF1Q9H3M0 494 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 GOLPH3Q9H4A6 298 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 CD93Q9NPY3 652 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 SMG5Q9UPR3 1016 aaKnown RBP9.93□□□□□ -0.82
LINC00339-210ENST00000635675 MFHAS1Q9Y4C4 1052 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 HYOU1Q9Y4L1 999 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 SDK1Q7Z5N4 2213 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 OTOGLQ3ZCN5 2332 aa9.93□□□□□ -0.82
LINC00339-210ENST00000635675 RIF1Q5UIP0 2472 aaKnown RBP9.92□□□□□ -0.82
LINC00339-210ENST00000635675 IGHV1OR15-9A0A0B4J2B8 117 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 A0A0U1RQJ8 604 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 ARHGAP42A6NI28 874 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 C3orf70A6NLC5 250 aaPredicted RBP9.92□□□□□ -0.82
LINC00339-210ENST00000635675 ALOX15BO15296 676 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 ARHGAP6O43182 974 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 BUB1O43683 1085 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 SPOPO43791 374 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 PRAMEF11O60813 436 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 RNASEH1O60930 286 aaKnown RBP9.92□□□□□ -0.82
LINC00339-210ENST00000635675 KDELR1P24390 212 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 CST6Q15828 149 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 INO80DQ53TQ3 878 aaPredicted RBP9.92□□□□□ -0.82
LINC00339-210ENST00000635675 C22orf39Q6P5X5 142 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 TMCO3Q6UWJ1 677 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 LEKR1Q6ZMV7 388 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 KIAA1328Q86T90 577 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 VSIG1Q86XK7 387 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 CACUL1Q86Y37 369 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 MMAAQ8IVH4 418 aaKnown RBP9.92□□□□□ -0.82
LINC00339-210ENST00000635675 TP53INP2Q8IXH6 220 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 RHOT1Q8IXI2 618 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 PLPP6Q8IY26 295 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 NETO2Q8NC67 525 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 CASKIN2Q8WXE0 1202 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 SPACA7Q96KW9 195 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 CALN1Q9BXU9 219 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 TNKS2Q9H2K2 1166 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 PDFQ9HBH1 243 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 KLHL11Q9NVR0 708 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 PPM1HQ9ULR3 514 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 SCML1Q9UN30 329 aa9.92□□□□□ -0.82
LINC00339-210ENST00000635675 CYP8B1Q9UNU6 501 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms