RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SLC18A2Q05940 514 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 DNAJC3Q13217 504 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 TEX44Q53QW1 395 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 FAM171A1Q5VUB5 890 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 RWDD4Q6NW29 188 aaKnown RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 MSANTD2Q6P1R3 559 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 CASC4Q6P4E1 433 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 UNC5AQ6ZN44 842 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 FAM126BQ8IXS8 530 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 C4orf33Q8N1A6 199 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 PPM1NQ8N819 430 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 SPPL2BQ8TCT7 592 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 TTC17Q96AE7 1141 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 C1orf74Q96LT6 269 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 CASD1Q96PB1 797 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 TSGA13Q96PP4 275 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 BARD1Q99728 777 aaKnown RBP7.31□□□□□ -1.24
BRCA1-230ENST00000634433 PITPNM3Q9BZ71 974 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 BFARQ9NZS9 450 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 TSC2P49815 1807 aa7.31□□□□□ -1.24
BRCA1-230ENST00000634433 A0A1W2PQH9 124 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 FAM159BA6NKW6 160 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 CCT8L1PA6NM43 557 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 FOXO6A8MYZ6 492 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 TAC1P20366 129 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 FGFR3P22607 806 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 PSMB4P28070 264 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 RPA3P35244 121 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 MAGEA9P43362 315 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 NPY2RP49146 381 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 WDR4P57081 412 aaKnown RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 FAAP100Q0VG06 881 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 EFTUD2Q15029 972 aaKnown RBP eCLIP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 PDK4Q16654 411 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 FAM109BQ6ICB4 259 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 SPATC1Q76KD6 591 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ZNF534Q76KX8 674 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 SCD5Q86SK9 330 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 C11orf74Q86VG3 221 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 CEP57Q86XR8 500 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 CCDC33Q8N5R6 958 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 FAM169BQ8N8A8 192 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 PDCD7Q8N8D1 485 aaKnown RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 BANPQ8N9N5 519 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 MZB1Q8WU39 189 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 DEPDC1BQ8WUY9 529 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 SPATA17Q96L03 361 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 CEP295NLQ96MC4 621 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 IQCGQ9H095 443 aaKnown RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 SIK2Q9H0K1 926 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ZNF700Q9H0M5 742 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 GBA3Q9H227 469 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 VPS11Q9H270 941 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ANLNQ9NQW6 1124 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 AASDHPPTQ9NRN7 309 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 OBP2AQ9NY56 170 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 IL37Q9NZH6 218 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 DNAJB4Q9UDY4 337 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 SUN2Q9UH99 717 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 TLR6Q9Y2C9 796 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 SLC4A7Q9Y6M7 1214 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ALPK3Q96L96 1907 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 F8W810 466 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 LPXNO60711 386 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 PAGE1O75459 146 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ALDH1A2O94788 518 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 AP2A1O95782 977 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 POLBP06746 335 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 OR4Q2P0C623 313 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 SRGAP2BP0DMP2 458 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ALADP13716 330 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 YWHAQP27348 245 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 MAPK9P45984 424 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 TRPC1P48995 793 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 KPNA1P52294 538 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 RPL10AP62906 217 aaKnown RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 MTM1Q13496 603 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 FRG1Q14331 258 aaKnown RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 MTFR1Q15390 333 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 LACTB2Q53H82 288 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 SPANXN3Q5MJ09 141 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 TIGD7Q6NT04 549 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 CCDC81Q6ZN84 652 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 SPATA21Q7Z572 469 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 LINC00523Q86TU6 105 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ZNF354CQ86Y25 554 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 TRIM42Q8IWZ5 723 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ARL6IP6Q8N6S5 226 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 GBP7Q8N8V2 638 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ATP6V0D2Q8N8Y2 350 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 C1orf216Q8TAB5 229 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 FCRL2Q96LA5 508 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 LRRC40Q9H9A6 602 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 MLXIPLQ9NP71 852 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 TLR8Q9NR97 1041 aaKnown RBP7.3□□□□□ -1.24
BRCA1-230ENST00000634433 FGFR1OP2Q9NVK5 253 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 MOCS1Q9NZB8 636 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ZNF69Q9UC07 566 aa7.3□□□□□ -1.24
BRCA1-230ENST00000634433 ARL2BPQ9Y2Y0 163 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms