RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 KCTD15Q96SI1 283 aaPredicted RBP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 RBM15Q96T37 977 aaKnown RBP eCLIP12.71□□□□□ -0.381e-6■■■■□ 22.8
SYNGAP1-207ENST00000628646 WDR83Q9BRX9 315 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 IPO11Q9UI26 975 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 INHBAP08476 426 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 ETS1P14921 441 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 EZRP15311 586 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 SCNN1BP51168 640 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 UBXN2BQ14CS0 331 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 TRIM68Q6AZZ1 485 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 GRAMD4Q6IC98 578 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 NPNTQ6UXI9 565 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 ZCCHC9Q8N567 271 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 MAML1Q92585 1016 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 RNF157Q96PX1 679 aa12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 RBM22Q9NW64 420 aaKnown RBP eCLIP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 DRG1Q9Y295 367 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-207ENST00000628646 RALGAPA2Q2PPJ7 1873 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 A0A1B0GVM2 712 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 TCAF2A6NFQ2 919 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 GOLGA8MH3BSY2 632 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 STC2O76061 302 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 CD48P09326 243 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 NFKBIAP25963 317 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 AIF1P55008 147 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 MARC1Q5VT66 337 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 CGB2Q6NT52 195 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 FBXL22Q6P050 247 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 VN1R2Q8NFZ6 395 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 TRMT2BQ96GJ1 504 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 SLC22A12Q96S37 553 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 TM6SF2Q9BZW4 377 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 RNF38Q9H0F5 515 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 XPO7Q9UIA9 1087 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 COMMD10Q9Y6G5 202 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 FAM47DPA6NHR8 397 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 PMPCBO75439 489 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 APODP05090 189 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 CYP4V2Q6ZWL3 525 aaPredicted RBP12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 CTAGE3PQ8IX95 158 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 FLCNQ8NFG4 579 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 GABPB2Q8TAK5 448 aaPredicted RBP12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 SLC35B2Q8TB61 432 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 MGARPQ8TDB4 240 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 E2F7Q96AV8 911 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 ASIC4Q96FT7 647 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 CSPG4P5Q96PW8 444 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 RAB6BQ9NRW1 208 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 GDE1Q9NZC3 331 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 KIAA1522Q9P206 1035 aaPredicted RBP12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 EFR3BQ9Y2G0 817 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 MTCH2Q9Y6C9 303 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 USP3Q9Y6I4 520 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 HMGA1P17096 107 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 PSMC3P17980 439 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 CA4P22748 312 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 HOXA9P31269 272 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 DGKGP49619 791 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 HIF1AQ16665 826 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 FAXCQ5TGI0 409 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 LILRA6Q6PI73 481 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 RNF135Q8IUD6 432 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 C10orf88Q9H8K7 445 aa12.7□□□□□ -0.38
SYNGAP1-207ENST00000628646 PDCD11Q14690 1871 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 TMEM265A0A087WTH1 108 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 SUN1O94901 812 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 L1CAMP32004 1257 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 MAGEA4P43358 317 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 CXCR3P49682 368 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 FASTKD3Q14CZ7 662 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 MORF4L2Q15014 288 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 TIGD7Q6NT04 549 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 CDKL2Q92772 493 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 NKD2Q969F2 451 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 SLC2A13Q96QE2 648 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 ZNF670Q9BS34 389 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 LMCD1Q9NZU5 365 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 UBA2Q9UBT2 640 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 RNASEH1O60930 286 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 ADH5P11766 374 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 HNRNPH1P31943 449 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 TMED2Q15363 201 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 RAB41Q5JT25 222 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 IPMKQ8NFU5 416 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 OR7D4Q8NG98 312 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 TEKT4Q8WW24 435 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 TMEM121Q9BTD3 319 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 PCDH9Q9HC56 1237 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 WDR6Q9NNW5 1121 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 PAK5Q9P286 719 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 FZD10Q9ULW2 581 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 HS3ST4Q9Y661 456 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 DNALI1O14645 258 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 TNFRSF10BO14763 440 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 MTSS1O43312 755 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 F11P03951 625 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 APRTP07741 180 aa12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 MLLT6P55198 1093 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 GEMIN4P57678 1058 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-207ENST00000628646 RAB6CQ53S08 254 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms