RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 BAG1Q99933 345 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 SGK2Q9HBY8 427 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 EPN1Q9Y6I3 576 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 OTOGLQ3ZCN5 2332 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 NYNRINQ9P2P1 1898 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 ZFHX2Q9C0A1 2572 aaPredicted RBP14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 RIF1Q5UIP0 2472 aaKnown RBP14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 ZNF487B1APH4 448 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 SLC7A4O43246 635 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 ZMPSTE24O75844 475 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 RARAP10276 462 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 SDHBP21912 280 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 STK19P49842 368 aaPredicted RBP14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 CST6Q15828 149 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 ODF2Q5BJF6 829 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 WDR45BQ5MNZ6 344 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 LRRC38Q5VT99 294 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 LYSMD4Q5XG99 296 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 C22orf39Q6P5X5 142 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 TMCO3Q6UWJ1 677 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 CYP4V2Q6ZWL3 525 aaPredicted RBP14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 CYP2U1Q7Z449 544 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 LRRC49Q8IUZ0 686 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 ZNF366Q8N895 744 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 HSPH1Q92598 858 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 PPP1R16AQ96I34 528 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 ZNF670Q9BS34 389 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 PACSIN1Q9BY11 444 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 BTBD1Q9H0C5 482 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 PABPC3Q9H361 631 aaKnown RBP14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 VPS45Q9NRW7 570 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 HAUS2Q9NVX0 235 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 SUSD2Q9UGT4 822 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 CYP8B1Q9UNU6 501 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 PCDHA13Q9Y5I0 950 aa14.3□□□□□ -0.12
SNRPA1-216ENST00000626000 VPS13AQ96RL7 3174 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 RASA4BC9J798 803 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 RASA4O43374 803 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 SNAP91O60641 907 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 GOT1P17174 413 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 ERCC2P18074 760 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 SNRPD1P62314 119 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 LMNB2Q03252 620 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 RAD51Q06609 339 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 SERINC3Q13530 473 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 RFTN1Q14699 578 aaPredicted RBP14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 GRM3Q14832 879 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 CSRP2Q16527 193 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 IFI16Q16666 785 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 Q6ZVU0 165 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 CCDC112Q8NEF3 446 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 TMIEQ8NEW7 156 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 CEP76Q8TAP6 659 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 FAM71BQ8TC56 605 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 GANCQ8TET4 914 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 UBE2Q2Q8WVN8 375 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 RLN3Q8WXF3 142 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 TOE1Q96GM8 510 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 KCTD15Q96SI1 283 aaPredicted RBP14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 OMDQ99983 421 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 KDM4CQ9H3R0 1056 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 DYRK4Q9NR20 520 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 GPATCH2LQ9NWQ4 482 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 WSB2Q9NYS7 404 aaPredicted RBP14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 THADAQ6YHU6 1953 aa14.29□□□□□ -0.12
SNRPA1-216ENST00000626000 BCLAF3A2AJT9 711 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 LRRC72A6NJI9 287 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 BUB1O43683 1085 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 GSRP00390 522 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 IL1BP01584 269 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 GNSP15586 552 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 IL1R2P27930 398 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 SLC8A1P32418 973 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 NUDT1P36639 197 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 MPLP40238 635 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 NOP2P46087 812 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 DHPSP49366 369 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 CDH6P55285 790 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 ARF5P84085 180 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 DPYSQ14117 519 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 MESDQ14696 234 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 CA9Q16790 459 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 SMTNL2Q2TAL5 461 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 KCNT1Q5JUK3 1230 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 ZFYVE27Q5T4F4 411 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 ZSCAN30Q86W11 494 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 SYT12Q8IV01 421 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 MMAAQ8IVH4 418 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 STK40Q8N2I9 435 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 BBS5Q8N3I7 341 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 KCTD6Q8NC69 237 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 ZNF419Q96HQ0 510 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 BTBD6Q96KE9 485 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 CSPG4P5Q96PW8 444 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 OSBPL1AQ9BXW6 950 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 LRRC19Q9H756 370 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 PCDH18Q9HCL0 1135 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 OSGEPQ9NPF4 335 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 FBXL12Q9NXK8 326 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 DDX56Q9NY93 547 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms