RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 TUBBP07437 444 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 IFI35P80217 286 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 SLC12A1Q13621 1099 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 PLEKHG6Q3KR16 790 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 ANKRD20A2Q5SQ80 823 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 ANKRD20A1Q5TYW2 823 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 ANKRD20A3Q5VUR7 823 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 IFT20Q8IY31 132 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 ZNF567Q8N184 647 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 PLCD3Q8N3E9 789 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 TAB3Q8N5C8 712 aaPredicted RBP18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 DCAF4L2Q8NA75 395 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 TTC8Q8TAM2 541 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 FATE1Q969F0 183 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 LMLNQ96KR4 655 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 PNKPQ96T60 521 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 VAT1Q99536 393 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 BRD9Q9H8M2 597 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 DNAJC17Q9NVM6 304 aaKnown RBP18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 GTSE1Q9NYZ3 720 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 LIMD1Q9UGP4 676 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 GGA2Q9UJY4 613 aa18.18■□□□□ 0.5
PTCHD3-202ENST00000622555 COL4A3Q01955 1670 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 EYSQ5T1H1 3165 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 CCDC151A5D8V7 595 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 SNAP91O60641 907 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 OPHN1O60890 802 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 PEX11BO96011 259 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 PABPC1P11940 636 aaKnown RBP18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 RPL21P46778 160 aaKnown RBP18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 AAK1Q2M2I8 961 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 TEX44Q53QW1 395 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 PID1Q7Z2X4 250 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 HNRNPLLQ8WVV9 542 aaKnown RBP18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 MAML1Q92585 1016 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 AGAP3Q96P47 875 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 C2orf49Q9BVC5 232 aaPredicted RBP18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 PDFQ9HBH1 243 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 VPS51Q9UID3 782 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 FAM50BQ9Y247 325 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 MYO10Q9HD67 2058 aa18.17■□□□□ 0.5
PTCHD3-202ENST00000622555 XIRP2A4UGR9 3374 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 KIAA1549LQ6ZVL6 1849 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 DGKGP49619 791 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 RENBPP51606 427 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 PLK1P53350 603 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 TFF2Q03403 129 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 HNRNPDQ14103 355 aaKnown RBP18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 TRADDQ15628 312 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 PUS10Q3MIT2 529 aaKnown RBP18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 PITRM1Q5JRX3 1037 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 TMCO4Q5TGY1 634 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 MARC1Q5VT66 337 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 C4orf22Q6V702 233 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 C12orf40Q86WS4 652 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 CASKIN2Q8WXE0 1202 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 IFT81Q8WYA0 676 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 RUBCNQ92622 972 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 LRRC45Q96CN5 670 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 SNF8Q96H20 258 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 ZNF599Q96NL3 588 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 IL12RB2Q99665 862 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 GDF3Q9NR23 364 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 RBM22Q9NW64 420 aaKnown RBP eCLIP18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 UBA2Q9UBT2 640 aaPredicted RBP18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 FBXO10Q9UK96 956 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 TRHDEQ9UKU6 1024 aa18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 INTS6Q9UL03 887 aaKnown RBP18.16■□□□□ 0.5
PTCHD3-202ENST00000622555 BHMG1C9JSJ3 638 aaPredicted RBP18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 TRIM24O15164 1050 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 TULP3O75386 442 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 ZMPSTE24O75844 475 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 IVDP26440 423 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 ARF5P84085 180 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 SLC10A7Q0GE19 358 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 LBRQ14739 615 aaKnown RBP18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 GAB4Q2WGN9 574 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 ITPRIPL2Q3MIP1 535 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 FUT11Q495W5 492 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 LINGO4Q6UY18 593 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 ETFBKMTQ8IXQ9 262 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 SEC14L1Q92503 715 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 TEKT5Q96M29 485 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 KCNK12Q9HB15 430 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 PRDM6Q9NQX0 595 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 FAM114A2Q9NRY5 505 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 TTLL3Q9Y4R7 772 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 ACTL7AQ9Y615 435 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 SPTBN5Q9NRC6 3674 aaKnown RBP18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 F5H423 210 aaPredicted RBP18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 ZBTB24O43167 697 aaPredicted RBP18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 MMP13P45452 471 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 DRG2P55039 364 aaKnown RBP18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 BASP1P80723 227 aaKnown RBP18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 DMC1Q14565 340 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 FAXCQ5TGI0 409 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 IZUMO3Q5VZ72 239 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 ITPRIPL1Q6GPH6 555 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 WDR93Q6P2C0 686 aa18.15■□□□□ 0.5
PTCHD3-202ENST00000622555 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms