RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 STARD3Q14849 445 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 DLG2Q15700 870 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 TMCO3Q6UWJ1 677 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 LEKR1Q6ZMV7 388 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 NT5DC3Q86UY8 548 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 WDR5BQ86VZ2 330 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 LONP2Q86WA8 852 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 VSIG1Q86XK7 387 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 ANP32BQ92688 251 aaKnown RBP14.62□□□□□ -0.07
CBWD3-217ENST00000621474 VOPP1Q96AW1 172 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 FAM86C1Q9NVL1 165 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 CEP192Q8TEP8 1941 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 ZNF487B1APH4 448 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 J3KR12 359 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 AXIN1O15169 862 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 MFSD11O43934 449 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 KRT1P04264 644 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 PAPOLAP51003 745 aaKnown RBP14.61□□□□□ -0.07
CBWD3-217ENST00000621474 TAZQ16635 292 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 Q6ZVU0 165 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 TMPRSS6Q8IU80 811 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 KATNAL2Q8IYT4 538 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 TXLNBQ8N3L3 684 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 PLD5Q8N7P1 536 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 FRMD1Q8N878 549 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 ATP11CQ8NB49 1132 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 KIAA1524Q8TCG1 905 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 RNF25Q96BH1 459 aaPredicted RBP14.61□□□□□ -0.07
CBWD3-217ENST00000621474 RNF157Q96PX1 679 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 FAM129BQ96TA1 746 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 SUN2Q9UH99 717 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 GUCA1BQ9UMX6 200 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 PPP2R2CQ9Y2T4 447 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 FCF1Q9Y324 198 aaKnown RBP14.61□□□□□ -0.07
CBWD3-217ENST00000621474 PCDHGA2Q9Y5H1 932 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 R4GN57 208 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 GPR179Q6PRD1 2367 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 FRYLO94915 3013 aa14.61□□□□□ -0.07
CBWD3-217ENST00000621474 EDDM13A0A1B0GTR0 161 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 RNF103O00237 685 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 HRO43593 1189 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 KRT86O43790 486 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 SYNCRIPO60506 623 aaKnown RBP14.6□□□□□ -0.07
CBWD3-217ENST00000621474 CDKN2BP42772 138 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 PEX5P50542 639 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 CLCN6P51797 869 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 NRLP54845 237 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 ADCY2Q08462 1091 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 SLC10A2Q12908 348 aaPredicted RBP14.6□□□□□ -0.07
CBWD3-217ENST00000621474 PAFAH1B3Q15102 231 aaKnown RBP14.6□□□□□ -0.07
CBWD3-217ENST00000621474 SLC9A4Q6AI14 798 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 RETSATQ6NUM9 610 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 C22orf39Q6P5X5 142 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 MFSD7Q6UXD7 560 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 CACUL1Q86Y37 369 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 MAP7D3Q8IWC1 876 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 RNF10Q8N5U6 811 aaKnown RBP14.6□□□□□ -0.07
CBWD3-217ENST00000621474 LZTR1Q8N653 840 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 OR2T3Q8NH03 318 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 ALG3Q92685 438 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 TSGA10Q9BZW7 698 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 RSPH9Q9H1X1 276 aaPredicted RBP14.6□□□□□ -0.07
CBWD3-217ENST00000621474 LZTFL1Q9NQ48 299 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 DDX56Q9NY93 547 aaKnown RBP14.6□□□□□ -0.07
CBWD3-217ENST00000621474 DONSONQ9NYP3 566 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 PACSIN2Q9UNF0 486 aaPredicted RBP14.6□□□□□ -0.07
CBWD3-217ENST00000621474 ARIH1Q9Y4X5 557 aaPredicted RBP14.6□□□□□ -0.07
CBWD3-217ENST00000621474 PCDHA3Q9Y5H8 950 aa14.6□□□□□ -0.07
CBWD3-217ENST00000621474 TARSL2A2RTX5 802 aaKnown RBP14.59□□□□□ -0.07
CBWD3-217ENST00000621474 PRAMEF11O60813 436 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 ALDH1A2O94788 518 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 FTCDO95954 541 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 PEX11BO96011 259 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 CTNNA2P26232 953 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 NNMTP40261 264 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 GBE1Q04446 702 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 SLC20A2Q08357 652 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 ACCSLQ4AC99 568 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 ZFYVE27Q5T4F4 411 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 STK40Q8N2I9 435 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 OR2A12Q8NGT7 310 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 RLN3Q8WXF3 142 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 PHOX2BQ99453 314 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 PRDM16Q9HAZ2 1276 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 HPCAL4Q9UM19 191 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 THADAQ6YHU6 1953 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 ANKRD36A6QL64 1941 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 TNRC6BQ9UPQ9 1833 aaKnown RBP14.59□□□□□ -0.07
CBWD3-217ENST00000621474 ARHGAP42A6NI28 874 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 DFFAO00273 331 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 MAFKO60675 156 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 MAP3K6O95382 1288 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 CTSLP07711 333 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 SERPINB6P35237 376 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 NBL1P41271 181 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 METAP1P53582 386 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 RPS14P62263 151 aaKnown RBP14.59□□□□□ -0.07
CBWD3-217ENST00000621474 NHLH1Q02575 133 aa14.59□□□□□ -0.07
CBWD3-217ENST00000621474 ELAVL3Q14576 367 aaKnown RBP14.59□□□□□ -0.07
CBWD3-217ENST00000621474 MAP7D1Q3KQU3 841 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms