RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PHF21BQ96EK2 531 aa9.94□□□□□ -0.82
CLTCL1-211ENST00000621271 ANKRD27Q96NW4 1050 aa9.94□□□□□ -0.82
CLTCL1-211ENST00000621271 SMAD5Q99717 465 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-211ENST00000621271 RERGLQ9H628 205 aa9.94□□□□□ -0.82
CLTCL1-211ENST00000621271 POLMQ9NP87 494 aaPredicted RBP9.94□□□□□ -0.82
CLTCL1-211ENST00000621271 GNPTGQ9UJJ9 305 aa9.94□□□□□ -0.82
CLTCL1-211ENST00000621271 AVILO75366 819 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PABPC1P11940 636 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ZNF24P17028 368 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ITGAXP20702 1163 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 SARSP49591 514 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PEX5P50542 639 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 COPAP53621 1224 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 IL2P60568 153 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 TBL3Q12788 808 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 WLSQ5T9L3 541 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 LBX2Q6XYB7 198 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ZNF571Q7Z3V5 609 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 LRRC49Q8IUZ0 686 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 LRRC52Q8N7C0 313 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 GPR152Q8TDT2 470 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 STARD8Q92502 1023 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 MCRS1Q96EZ8 462 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 REXO5Q96IC2 774 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PHPT1Q9NRX4 125 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ZNF112Q9UJU3 913 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ADAM28Q9UKQ2 775 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 OR10H1Q9Y4A9 318 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PCDHA3Q9Y5H8 950 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 C1orf232A0A0U1RR37 186 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 EPHX1P07099 455 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 TFE3P19532 575 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 HPCAL1P37235 193 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 GP5P40197 560 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PCYT1AP49585 367 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 IRF8Q02556 426 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 RGS1Q08116 209 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 GRSF1Q12849 480 aaKnown RBP eCLIP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 GRM3Q14832 879 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 LRRC36Q1X8D7 754 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 SPANXN3Q5MJ09 141 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 WDR59Q6PJI9 974 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PAFAH2Q99487 392 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 UNKQ9C0B0 810 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 CLIC5Q9NZA1 410 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 LRRC72A6NJI9 287 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 FAM220BPB1ANY3 271 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 RNASEH2AO75792 299 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ALBP02768 609 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ACRP10323 421 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PTPN2P17706 415 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 TARSP26639 723 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 DNAJC3Q13217 504 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 MPPE1Q53F39 396 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ADCK1Q86TW2 530 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 CYP4Z2PQ8N1L4 340 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 EFCAB3Q8N7B9 438 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 KLHL23Q8NBE8 558 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 BSNDQ8WZ55 320 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 FAIM2Q9BWQ8 316 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PACSIN1Q9BY11 444 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 EFCAB1Q9HAE3 211 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 OSGEPQ9NPF4 335 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 NR5A2O00482 541 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 BAIAP3O94812 1187 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 UBTFL6P0CB48 400 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 MGAT1P26572 445 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 SERPINB3P29508 390 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 CD86P42081 329 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ABL2P42684 1182 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 WASP42768 502 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 TRIP4Q15650 581 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 GRTP1Q5TC63 336 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 CTU1Q7Z7A3 348 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PARGQ86W56 976 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 PHYKPLQ8IUZ5 450 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 EPS8L3Q8TE67 593 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ZBTB10Q96DT7 871 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 MAGEB18Q96M61 343 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 CNPPD1Q9BV87 410 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 CLDND1Q9NY35 253 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 ARHGAP20Q9P2F6 1191 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
CLTCL1-211ENST00000621271 CHURC1-FNTBB4DL54 471 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 TPST1O60507 370 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 SH3BGRLO75368 114 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 ALPPL2P10696 532 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 THRAP10827 490 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 COX7A2P14406 83 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 VSTM1Q6UX27 236 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 MAML3Q96JK9 1138 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 DEPDC7Q96QD5 511 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 NXF3Q9H4D5 531 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 PAIP2BQ9ULR5 123 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 BCL9LQ86UU0 1499 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 WDR27A2RRH5 827 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 ARHGEF9O43307 516 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 GNSP15586 552 aa9.92□□□□□ -0.82
CLTCL1-211ENST00000621271 SERPINB5P36952 375 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms