RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 GLOD4Q9HC38 313 aa10.12□□□□□ -0.79
VTA1-205ENST00000620996 CHRAC1Q9NRG0 131 aa10.12□□□□□ -0.79
VTA1-205ENST00000620996 C20orf96Q9NUD7 363 aaPredicted RBP10.12□□□□□ -0.79
VTA1-205ENST00000620996 FETUBQ9UGM5 382 aa10.12□□□□□ -0.79
VTA1-205ENST00000620996 SRRM3A6NNA2 597 aaPredicted RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 MATN3O15232 486 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 SOD2P04179 222 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 RHOQP17081 205 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 PRKCHP24723 683 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 EIF4EBP2Q13542 120 aaPredicted RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 POLD3Q15054 466 aaPredicted RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 ANO4Q32M45 955 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 HSP90AA5PQ58FG0 334 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 HECTD3Q5T447 861 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 MANEALQ5VSG8 457 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 TBL1YQ9BQ87 522 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 SLCO1B3Q9NPD5 702 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 WBP1LQ9NX94 342 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 SPG21Q9NZD8 308 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 GRID1Q9ULK0 1009 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 YIPF1Q9Y548 306 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 TRIM43BA6NCK2 446 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 TYROBPO43914 113 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 TBC1D4O60343 1298 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 ZNF189O75820 626 aaPredicted RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 ASMTLO95671 621 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 GSTA2P09210 222 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 TACR2P21452 398 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 WDR5P61964 334 aaKnown RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 CDH17Q12864 832 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 THEMIS2Q5TEJ8 643 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 IL31Q6EBC2 164 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 SLC8B1Q6J4K2 584 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
VTA1-205ENST00000620996 ARNTL2Q8WYA1 636 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 TRIM43Q96BQ3 446 aaPredicted RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 APOPT1Q96IL0 206 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 UBE2OQ9C0C9 1292 aaKnown RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 AFF4Q9UHB7 1163 aaKnown RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 AAR2Q9Y312 384 aaKnown RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 PSAT1Q9Y617 370 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 ABHD14A-ACY1A0A1B0GW23 586 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 FAM159BA6NKW6 160 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 ANXA9O76027 345 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 TOP3BO95985 862 aaKnown RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 TAC1P20366 129 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 ACVRL1P37023 503 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 RANBP1P43487 201 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 MGAT5Q09328 741 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 MARC1Q5VT66 337 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 C16orf59Q7L2K0 433 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 BANPQ8N9N5 519 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 ZNF461Q8TAF7 563 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 AZIN2Q96A70 460 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 ALKBH8Q96BT7 664 aaKnown RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 MYEOVQ96EZ4 313 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 CERS2Q96G23 380 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 FCRL3Q96P31 734 aaPredicted RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 SRPK1Q96SB4 655 aaKnown RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 NAT9Q9BTE0 207 aa10.11□□□□□ -0.79
VTA1-205ENST00000620996 IARS2Q9NSE4 1012 aaKnown RBP10.11□□□□□ -0.79
VTA1-205ENST00000620996 HTR7P34969 479 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 CD86P42081 329 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 CHRNA4P43681 627 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 SLC11A2P49281 568 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 SLC10A7Q0GE19 358 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 RBBP5Q15291 538 aaKnown RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 SPATA21Q7Z572 469 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 STRA8Q7Z7C7 330 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 TMEM199Q8N511 208 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 ZSCAN18Q8TBC5 510 aaPredicted RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 MZB1Q8WU39 189 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 ZNF419Q96HQ0 510 aaPredicted RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 C1orf74Q96LT6 269 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 AGAP2Q99490 1192 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 TMEM106CQ9BVX2 250 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 VPS11Q9H270 941 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 MRPL17Q9NRX2 175 aaKnown RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 C2orf78A6NCI8 922 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 ERI2A8K979 691 aaKnown RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 COCHO43405 550 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 SUN1O94901 812 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 TIMP1P01033 207 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 MBL2P11226 248 aaPredicted RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 LAG3P18627 525 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 NMBRP28336 390 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 CORO1AP31146 461 aaKnown RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 GEMP55040 296 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 RPS24P62847 133 aaKnown RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 OVGP1Q12889 678 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 ZNF235Q14590 738 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 FAM133BQ5BKY9 247 aaKnown RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 SPANXN3Q5MJ09 141 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 NADSYN1Q6IA69 706 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 FBXO46Q6PJ61 603 aaPredicted RBP10.1□□□□□ -0.79
VTA1-205ENST00000620996 PACS1Q6VY07 963 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 NECAB2Q7Z6G3 386 aa10.1□□□□□ -0.79
VTA1-205ENST00000620996 LINC00523Q86TU6 105 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms