RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TCAF2A6NFQ2 919 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 IRF6O14896 467 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 CDH2P19022 906 aaPredicted RBP19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 MATKP42679 507 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 BCAT1P54687 386 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 PITX1P78337 314 aaPredicted RBP19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 KIZQ2M2Z5 673 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 MGAT5BQ3V5L5 792 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 NXNQ6DKJ4 435 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 KCNMB4Q86W47 210 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 CNTD1Q8N815 330 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 ANKRD52Q8NB46 1076 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 FAM156AQ8NDB6 213 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 OR6B3Q8NGW1 331 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 NPAS2Q99743 824 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 KLHL8Q9P2G9 620 aaPredicted RBP19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 VTI1BQ9UEU0 232 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 RNF11Q9Y3C5 154 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 AK5Q9Y6K8 562 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 A0A0J9YVX5 310 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 TRPA1O75762 1119 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 CABYRO75952 493 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 PTPN1P18031 435 aaKnown RBP19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 PTPN3P26045 913 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 NAGLUP54802 743 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 ADRM1Q16186 407 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 IL23RQ5VWK5 629 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 DEFB106AQ8N104 65 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 DNAAF2Q9NVR5 837 aaKnown RBP19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 PPP1R1BQ9UD71 204 aaPredicted RBP19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 SLC39A10Q9ULF5 831 aa19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 COPG1Q9Y678 874 aaKnown RBP19.91■□□□□ 0.78
PDLIM3-212ENST00000620787 TRMUO75648 421 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 PSMC3P17980 439 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 RPS12P25398 132 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 PGGT1BP53609 377 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 PRKAA2P54646 552 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 EMP3P54852 163 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 DPYSQ14117 519 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 GRM3Q14832 879 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 SLC25A52Q3SY17 297 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 SH3D19Q5HYK7 790 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 CERCAMQ5T4B2 595 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 UNC93AQ86WB7 457 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 TMA16Q96EY4 203 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 IARS2Q9NSE4 1012 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 ANKRD6Q9Y2G4 727 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 hCG_2014768A0A024R1R8 64 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 C7orf72A4D263 438 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 SLCO1B7G3V0H7 640 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 TRIM38O00635 465 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 SBF1O95248 1867 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 VTNP04004 478 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 TCN1P20061 433 aaPredicted RBP19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 GMPSP49915 693 aaPredicted RBP19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 ANO4Q32M45 955 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 KCTD11Q693B1 232 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 LINC01465Q8N7H1 131 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 DNAAF3Q8N9W5 541 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 NDRG1Q92597 394 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 ATP6V1E2Q96A05 226 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 GPR22Q99680 433 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 SPATC1LQ9H0A9 340 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 C20orf96Q9NUD7 363 aaPredicted RBP19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 THEGQ9P2T0 379 aa19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 MAGED2Q9UNF1 606 aaPredicted RBP19.9■□□□□ 0.78
PDLIM3-212ENST00000620787 SHROOM3Q8TF72 1996 aa19.89■□□□□ 0.78
PDLIM3-212ENST00000620787 DCLK1O15075 740 aa19.89■□□□□ 0.77
PDLIM3-212ENST00000620787 TSPAN1O60635 241 aa19.89■□□□□ 0.77
PDLIM3-212ENST00000620787 STYXQ8WUJ0 223 aa19.89■□□□□ 0.77
PDLIM3-212ENST00000620787 LZICQ8WZA0 190 aa19.89■□□□□ 0.77
PDLIM3-212ENST00000620787 AKT3Q9Y243 479 aa19.89■□□□□ 0.77
PDLIM3-212ENST00000620787 TSC2P49815 1807 aa19.89■□□□□ 0.77
PDLIM3-212ENST00000620787 CCDC166P0CW27 439 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 INSRRP14616 1297 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 GLRBP48167 497 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 TXNL4AP83876 142 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 PTK2BQ14289 1009 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 FBXO16Q8IX29 292 aaPredicted RBP19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 NUP93Q8N1F7 819 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 ZSCAN18Q8TBC5 510 aaPredicted RBP19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 EME1Q96AY2 570 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 ZNF597Q96LX8 424 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 ZMAT2Q96NC0 199 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 MLPHQ9BV36 600 aaPredicted RBP19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 CHRAC1Q9NRG0 131 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 TUBGCP4Q9UGJ1 667 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 TARM1B6A8C7 271 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 H0YJX3 145 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 PHGDHO43175 533 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 PGK2P07205 417 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 C8BP07358 591 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 ZNF23P17027 643 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 CYTH1Q15438 398 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 NRF1Q16656 503 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 TSPAN14Q8NG11 270 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 ASB9Q96DX5 294 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 SCYL1Q96KG9 808 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 SETD4Q9NVD3 440 aa19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 TLK1Q9UKI8 766 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms