RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	SPATS1	Q496A3	300 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZCWPW2	Q504Y3	356 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TMC5	Q6UXY8	1006 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ADAMTSL2	Q86TH1	951 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SRFBP1	Q8NEF9	429 aa	Known RBP	4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SLC13A3	Q8WWT9	602 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	AUTS2	Q8WXX7	1259 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZFYVE21	Q9BQ24	234 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TRIM56	Q9BRZ2	755 aa	Known RBP	4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	FAM204A	Q9H8W3	233 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DMRT3	Q9NQL9	472 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	KLHL14	Q9P2G3	628 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	HSFX1	Q9UBD0	423 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CYTH4	Q9UIA0	394 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TSC22D4	Q9Y3Q8	395 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ANKRD31	Q8N7Z5	1873 aa		4.17	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RNF103-CHMP3	A0A140T963	221 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836		A8MX80	341 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RNF103	O00237	685 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MATN2	O00339	956 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	LAD1	O00515	517 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF197	O14709	1029 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	KCNN4	O15554	427 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZSCAN12	O43309	604 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	LUC7L3	O95232	432 aa	Known RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PRAMEF12	O95522	483 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PRL	P01236	227 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CLTA	P09496	248 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	STAG3L3	P0CL85	134 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ERVK-10	P10266	1014 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CCDC130	P13994	396 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GNS	P15586	552 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PLCG1	P19174	1290 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PIK3CB	P42338	1070 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CCT3	P49368	545 aa	Known RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	OAZ1	P54368	228 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PEX3	P56589	373 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SOX10	P56693	466 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MRPS25	P82663	173 aa	Known RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CYP27A1	Q02318	531 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DNM1	Q05193	864 aa	Known RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SCRN3	Q0VDG4	424 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	IL24	Q13007	206 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	EFR3A	Q14156	821 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	POLD3	Q15054	466 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PON2	Q15165	354 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	KCNA10	Q16322	511 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RTN1	Q16799	776 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DEFB115	Q30KQ5	88 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	NKAIN1	Q4KMZ8	207 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF805	Q5CZA5	627 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TMEM31	Q5JXX7	168 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MARCH8	Q5T0T0	291 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	METTL21C	Q5VZV1	264 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TMEM214	Q6NUQ4	689 aa	Known RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MTFR2	Q6P444	385 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	USP17L6P	Q6QN14	398 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RTL4	Q6ZR62	310 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CAMKMT	Q7Z624	323 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SLC9A9	Q8IVB4	645 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	HERC6	Q8IVU3	1022 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DIS3L2	Q8IYB7	885 aa	Known RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	OR13C2	Q8NGS9	318 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DNAJB8	Q8NHS0	232 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SETD7	Q8WTS6	366 aa	Known RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DEPDC1B	Q8WUY9	529 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	OR1E3	Q8WZA6	343 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	BRF1	Q92994	677 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MRPL38	Q96DV4	380 aa	Known RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TMEM41A	Q96HV5	264 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	KCNJ15	Q99712	375 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	METTL22	Q9BUU2	404 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CELF4	Q9BZC1	486 aa	Known RBP	4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SNX15	Q9NRS6	342 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SOHLH2	Q9NX45	425 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RAB20	Q9NX57	234 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CAMK2A	Q9UQM7	478 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ENTPD4	Q9Y227	616 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	AKT3	Q9Y243	479 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	VWA7	Q9Y334	891 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	LRRC42	Q9Y546	428 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	FAM169A	Q9Y6X4	670 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	UBN2	Q6ZU65	1347 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836		A4D1N5	150 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	OR5K3	A6NET4	321 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CCDC154	A6NI56	674 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836		H0Y858	1186 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ADAMTS3	O15072	1205 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CYTIP	O60759	359 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GCAT	O75600	419 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GDF11	O95390	407 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MYBL1	P10243	752 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	AR	P10275	920 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ICAM2	P13598	275 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ITGB6	P18564	788 aa		4.16	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DPP6	P42658	865 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms